RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 STEAP1Q9UHE8 339 aa16.75■□□□□ 0.27
SMARCC2-210ENST00000550519 FCN1O00602 326 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 RAB29O14966 203 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 ST8SIA5O15466 376 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 CT45A6P0DMU7 189 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 CT45A5P0DMU8 189 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 CT45A7P0DMV0 189 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 GP9P14770 177 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 WNT4P56705 351 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 GABPB1Q06547 395 aaPredicted RBP16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 OR10K2Q6IF99 312 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 LAIR2Q6ISS4 152 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 ACSM6Q6P461 480 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 ZNF880Q6PDB4 577 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 CD200R1LQ6Q8B3 271 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 OVCH2Q7RTZ1 564 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 C6orf201Q7Z4U5 140 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 SVOPQ8N4V2 548 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 CASTOR1Q8WTX7 329 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 IL1F10Q8WWZ1 152 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 DNAH7Q8WXX0 4024 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 TENM2Q9NT68 2774 aa16.74■□□□□ 0.27
SMARCC2-210ENST00000550519 DYNC2H1Q8NCM8 4307 aaKnown RBP16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 IGHV4OR15-8A0A075B7B6 117 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 A0A087WW49 117 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 OR5H14A6NHG9 310 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 NAPSAO96009 420 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 FRMD6-AS1P0C7T7 363 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 RPS27AP62979 156 aaKnown RBP16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 RPL39P5Q59GN2 51 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 DHRSXQ8N5I4 330 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 GHITMQ9H3K2 345 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 SLC23A1Q9UHI7 598 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 PSORS1C1Q9UIG5 152 aa16.73■□□□□ 0.27
SMARCC2-210ENST00000550519 H0YJW9 148 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 MYL12BO14950 172 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 HTR2CP28335 458 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 TMEM267Q0VDI3 215 aaPredicted RBP16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 INSL4Q14641 139 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 C1orf100Q5SVJ3 147 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 PYHIN1Q6K0P9 492 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 NANOGP1Q8N7R0 232 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 OR6Q1Q8NGQ2 317 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 ARPC1AQ92747 370 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 AGMATQ9BSE5 352 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 TM2D1Q9BX74 207 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 PARP12Q9H0J9 701 aaKnown RBP16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 A3GALT2U3KPV4 340 aa16.72■□□□□ 0.27
SMARCC2-210ENST00000550519 ITGB1BP1O14713 200 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 MC5RP33032 325 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 PLGLAQ15195 96 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 ACSM3Q53FZ2 586 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 AKIRIN2Q53H80 203 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 GLDNQ6ZMI3 551 aaPredicted RBP16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 LRRTM1Q86UE6 522 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 PACRGLQ8N7B6 248 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 OR5AN1Q8NGI8 311 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 RNF5Q99942 180 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 NICN1Q9BSH3 213 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 TMEM59Q9BXS4 323 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 C8orf4Q9NR00 106 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 PLCXD1Q9NUJ7 323 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 GAB2Q9UQC2 676 aa16.71■□□□□ 0.27
SMARCC2-210ENST00000550519 TRIM64CA6NLI5 447 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 RBBP9O75884 186 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 HSPB1P04792 205 aaKnown RBP16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 GSTP1P09211 210 aaKnown RBP16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 OR8U9P0C7N5 309 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 UNC119Q13432 240 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 GLT8D1Q68CQ7 371 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 AHSA2Q719I0 299 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 PPP1R27Q86WC6 154 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 KCNG3Q8TAE7 436 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 ABHD14BQ96IU4 210 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 RNF150Q9ULK6 438 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 WASHC3Q9Y3C0 194 aa16.7■□□□□ 0.26
SMARCC2-210ENST00000550519 RYR2Q92736 4967 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 IGHV3-11P01762 117 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 GNAO1P09471 354 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 CD37P11049 281 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 QRFPP83859 136 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 ACTBL2Q562R1 376 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 ZNF562Q6V9R5 426 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 MOB1BQ7L9L4 216 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 MS4A15Q8N5U1 240 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 ABHD5Q8WTS1 349 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 FBLIM1Q8WUP2 373 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 PHYHIPQ92561 330 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 FLYWCH2Q96CP2 140 aaKnown RBP16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 RHOVQ96L33 236 aa16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 FAM103A1Q9BTL3 118 aaKnown RBP16.69■□□□□ 0.26
SMARCC2-210ENST00000550519 TRBV6-6A0A0A6YYG2 114 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 TMEM14DPA8MWL7 114 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 H7C2Y5 167 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 PROP1O75360 226 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 PITPNAQ00169 270 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 UNQ5815/PRO19632Q6UWF5 114 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 C8orf59Q8N0T1 100 aaPredicted RBP16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 LFNGQ8NES3 379 aa16.68■□□□□ 0.26
SMARCC2-210ENST00000550519 MS4A10Q96PG2 267 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms