RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 HMGN3Q15651 99 aa17.87■□□□□ 0.45
SMARCD1-209ENST00000550477 RNF5Q99942 180 aa17.87■□□□□ 0.45
SMARCD1-209ENST00000550477 ELOVL1Q9BW60 279 aa17.87■□□□□ 0.45
SMARCD1-209ENST00000550477 CNOT2Q9NZN8 540 aaKnown RBP17.87■□□□□ 0.45
SMARCD1-209ENST00000550477 H7C2Y5 167 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 RRHO14718 337 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 HSPB1P04792 205 aaKnown RBP17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 WNT4P56705 351 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 CX3CL1P78423 397 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 CASC10Q5T4H9 136 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 ACSM6Q6P461 480 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 FAM131AQ6UXB0 335 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 DHRSXQ8N5I4 330 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 ZNF485Q8NCK3 441 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 FBXL15Q9H469 300 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 SLC23A1Q9UHI7 598 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 A3GALT2U3KPV4 340 aa17.86■□□□□ 0.45
SMARCD1-209ENST00000550477 LYL1P12980 280 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 SLURP1P55000 103 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 LRRC36Q1X8D7 754 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 ACTBL2Q562R1 376 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 OVCH2Q7RTZ1 564 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 LYPD6Q86Y78 171 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 KCNG3Q8TAE7 436 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 FAAP24Q9BTP7 215 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 TMEM59Q9BXS4 323 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 ALX4Q9H161 411 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 RIMS4Q9H426 269 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 SLA2Q9H6Q3 261 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 WASHC3Q9Y3C0 194 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 NUBP2Q9Y5Y2 271 aa17.85■□□□□ 0.45
SMARCD1-209ENST00000550477 ST8SIA5O15466 376 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 FRMD6-AS1P0C7T7 363 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 AKIRIN2Q53H80 203 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 C6orf141Q5SZD1 244 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 CD200R1LQ6Q8B3 271 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 UNQ5815/PRO19632Q6UWF5 114 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 MOB1BQ7L9L4 216 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 PPP1R27Q86WC6 154 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 MS4A15Q8N5U1 240 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 SETD6Q8TBK2 473 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 EDARADDQ8WWZ3 215 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 SULT4A1Q9BR01 284 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 IFI27L2Q9H2X8 130 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 PLEKHJ1Q9NW61 149 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 MGAT4AQ9UM21 535 aa17.84■□□□□ 0.45
SMARCD1-209ENST00000550477 ARPC1AQ92747 370 aa17.83■□□□□ 0.44
SMARCD1-209ENST00000550477 IGHV4OR15-8A0A075B7B6 117 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 A0A087WW49 117 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 ITGB1BP1O14713 200 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 HSPA12AO43301 675 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 TFAP2AP05549 437 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 CT45A6P0DMU7 189 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 CT45A5P0DMU8 189 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 CT45A7P0DMV0 189 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 ZBTB25P24278 435 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 RPS27AP62979 156 aaKnown RBP17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 ZNF562Q6V9R5 426 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 C6orf201Q7Z4U5 140 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 C5orf24Q7Z6I8 188 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 C8orf59Q8N0T1 100 aaPredicted RBP17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 PACRGLQ8N7B6 248 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 RYR3Q15413 4870 aa17.82■□□□□ 0.44
SMARCD1-209ENST00000550477 SLC22A1O15245 554 aa17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 TPPP2P59282 170 aa17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 ACSM3Q53FZ2 586 aa17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 RPL39P5Q59GN2 51 aa17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 C19orf54Q5BKX5 351 aa17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 RBM48Q5RL73 367 aaKnown RBP17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 TSNAXQ99598 290 aaKnown RBP17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 METTL1Q9UBP6 276 aaKnown RBP17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 STUB1Q9UNE7 303 aa17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 FBXO7Q9Y3I1 522 aa17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 STAB2Q8WWQ8 2551 aa17.81■□□□□ 0.44
SMARCD1-209ENST00000550477 H0YJW9 148 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 SOX15O60248 233 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 BPNT1O95861 308 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 IGHV3-11P01762 117 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 CPEP16870 476 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 NDPQ00604 133 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 SRSF7Q16629 238 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 GLDNQ6ZMI3 551 aaPredicted RBP17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 AHSA2Q719I0 299 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 ANKRD13BQ86YJ7 626 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 SVOPQ8N4V2 548 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 NANOGP1Q8N7R0 232 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 OR5AN1Q8NGI8 311 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 CASTOR1Q8WTX7 329 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 PHYHIPQ92561 330 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 MS4A10Q96PG2 267 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 CLCC1Q96S66 551 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 URM1Q9BTM9 101 aaKnown RBP17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 TPSG1Q9NRR2 321 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 ZNF355PQ9NSJ1 428 aa17.8■□□□□ 0.44
SMARCD1-209ENST00000550477 EBAG9O00559 213 aa17.79■□□□□ 0.44
SMARCD1-209ENST00000550477 NAPSAO96009 420 aa17.79■□□□□ 0.44
SMARCD1-209ENST00000550477 TRGV3P03979 118 aa17.79■□□□□ 0.44
SMARCD1-209ENST00000550477 ZP3P21754 424 aa17.79■□□□□ 0.44
SMARCD1-209ENST00000550477 HTR2CP28335 458 aa17.79■□□□□ 0.44
SMARCD1-209ENST00000550477 CEACAM6P40199 344 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms