RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ATP5G3P48201 142 aa10.34□□□□□ -0.75
VDR-208ENST00000550325 RANP62826 216 aaKnown RBP10.34□□□□□ -0.75
VDR-208ENST00000550325 OR5D13Q8NGL4 314 aa10.34□□□□□ -0.75
VDR-208ENST00000550325 STARD4Q96DR4 205 aa10.34□□□□□ -0.75
VDR-208ENST00000550325 ZNF488Q96MN9 340 aa10.34□□□□□ -0.75
VDR-208ENST00000550325 PTRH2Q9Y3E5 179 aaKnown RBP10.34□□□□□ -0.75
VDR-208ENST00000550325 LOC102725191A0A1B0GVB3 256 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 ZNF32P17041 273 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 STPG4Q8N801 248 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 SLC17A3O00476 420 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 KRASP01116 189 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 CCL2P13500 99 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 PSMF1Q92530 271 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 APH1AQ96BI3 265 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 CLN8Q9UBY8 286 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 H0Y980 276 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 TMEM250H0YL14 139 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 LINC01565O15544 149 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 AMTP48728 403 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 FUT6P51993 359 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 UNQ5815/PRO19632Q6UWF5 114 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 OR6C1Q96RD1 312 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 HS3ST3A1Q9Y663 406 aa10.33□□□□□ -0.76
VDR-208ENST00000550325 TRAV38-1A0A0B4J264 116 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 CTXND1A0A1B0GTU2 59 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 GABRG2P18507 467 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 DRD1P21728 446 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 CEACAM8P31997 349 aaPredicted RBP10.32□□□□□ -0.76
VDR-208ENST00000550325 EDDM3BP56851 147 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 TFF3Q07654 80 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 SP5Q6BEB4 398 aaPredicted RBP10.32□□□□□ -0.76
VDR-208ENST00000550325 OR4C5Q8NGB2 326 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 OR1F12Q8NHA8 337 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 ABHD14BQ96IU4 210 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 PSMG3Q9BT73 122 aaPredicted RBP10.32□□□□□ -0.76
VDR-208ENST00000550325 FGF21Q9NSA1 209 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 ZNF586Q9NXT0 402 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 A0A1W2PPV4 95 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 AQP7P3A6NL99 342 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 IGHV4-34P06331 123 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 ZNF114Q8NC26 417 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
VDR-208ENST00000550325 KIR2DS1A0A191URI9 304 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 A0A1B0GX78 115 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 SH2D1BO14796 132 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 CCL25O15444 150 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 COX5AP20674 150 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 KIR2DS4P43632 304 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 HTD2P86397 168 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 KIR2DS1Q14954 304 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 ZNF295-AS1Q8N0V1 137 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 ZNF441Q8N8Z8 693 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 ST6GALNAC3Q8NDV1 305 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 CLDN23Q96B33 292 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 ZNF501Q96CX3 271 aaPredicted RBP10.32□□□□□ -0.76
VDR-208ENST00000550325 OR1A1Q9P1Q5 309 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 COLQQ9Y215 455 aaPredicted RBP10.32□□□□□ -0.76
VDR-208ENST00000550325 WIPI2Q9Y4P8 454 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 R4GN57 208 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 CHD9Q3L8U1 2897 aa10.32□□□□□ -0.76
VDR-208ENST00000550325 ABCA7Q8IZY2 2146 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 ZNF816Q0VGE8 651 aaPredicted RBP10.31□□□□□ -0.76
VDR-208ENST00000550325 VAMP3Q15836 100 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 GCSAMLQ5JQS6 135 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 SAPCD1Q5SSQ6 148 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 CFAP54Q96N23 3096 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 LNP1A1A4G5 178 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 CBR3O75828 277 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 CRYABP02511 175 aaKnown RBP10.31□□□□□ -0.76
VDR-208ENST00000550325 SUMO3P55854 103 aaPredicted RBP10.31□□□□□ -0.76
VDR-208ENST00000550325 SOX8P57073 446 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 OR8B8Q15620 311 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 LINC01551Q86U37 167 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 C20orf144Q9BQM9 153 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 AGMATQ9BSE5 352 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 OBP2AQ9NY56 170 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 IGKV1-6A0A0C4DH72 117 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 TRAPPC2LH3BP13 241 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 TNFSF11O14788 317 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 ZNF808Q8N4W9 903 aaPredicted RBP10.31□□□□□ -0.76
VDR-208ENST00000550325 DEFB126Q9BYW3 111 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 C2orf16Q68DN1 1984 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 TRIOO75962 3097 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 THADAQ6YHU6 1953 aa10.31□□□□□ -0.76
VDR-208ENST00000550325 OTX2P32243 289 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 WNT5BQ9H1J7 359 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 PRUNE2Q8WUY3 3088 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 SLC25A6P12236 298 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 CDC34P49427 236 aaPredicted RBP10.3□□□□□ -0.76
VDR-208ENST00000550325 RPL15P61313 204 aaKnown RBP10.3□□□□□ -0.76
VDR-208ENST00000550325 LCN2P80188 198 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 KCNMB1Q16558 191 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 SFRP2Q96HF1 295 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 NPPCP23582 126 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 TCL1AP56279 114 aa10.3□□□□□ -0.76
VDR-208ENST00000550325 PAFAH1B2P68402 229 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms