RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CTDSP2O14595 271 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 LANCL1O43813 399 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 HLA-DQB1P01920 261 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 FCER2P06734 321 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 FAM106CPP0CH98 169 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 C12orf54Q6X4T0 127 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 HOGA1Q86XE5 327 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 RBMXL1Q96E39 390 aaKnown RBP18.04■□□□□ 0.48
BRF1-216ENST00000550208 ABHD14BQ96IU4 210 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 AGMATQ9BSE5 352 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 RBM38Q9H0Z9 239 aaKnown RBP18.04■□□□□ 0.48
BRF1-216ENST00000550208 SAA2-SAA4A0A096LPE2 208 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 ZNF736B4DX44 427 aaPredicted RBP18.03■□□□□ 0.48
BRF1-216ENST00000550208 SAA2P0DJI9 122 aaPredicted RBP18.03■□□□□ 0.48
BRF1-216ENST00000550208 HABP2Q14520 560 aaPredicted RBP18.03■□□□□ 0.48
BRF1-216ENST00000550208 HNF4GQ14541 408 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 CNIH2Q6PI25 160 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 ZNF833PQ6ZTB9 187 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 OR4F5Q8NH21 305 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 EDARADDQ8WWZ3 215 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 ZNF251Q9BRH9 671 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 MIXL1Q9H2W2 232 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 CCDC59Q9P031 241 aaKnown RBP18.03■□□□□ 0.48
BRF1-216ENST00000550208 ANXA10Q9UJ72 324 aa18.03■□□□□ 0.48
BRF1-216ENST00000550208 TSPAN9O75954 239 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 DIRAS3O95661 229 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 IGKV1D-33P01593 117 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 IGKV1-33P01594 117 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 LPLP06858 475 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 RPL39P5Q59GN2 51 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 BEST4Q8NFU0 473 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 RBM14Q96PK6 669 aaKnown RBP18.02■□□□□ 0.48
BRF1-216ENST00000550208 GINS4Q9BRT9 223 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 PIPOXQ9P0Z9 390 aa18.02■□□□□ 0.48
BRF1-216ENST00000550208 RAB29O14966 203 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 CTXN2P0C2S0 81 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 PRSS3P35030 304 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 CBX5P45973 191 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 HES1Q14469 280 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 H1FOOQ8IZA3 346 aaPredicted RBP18.01■□□□□ 0.47
BRF1-216ENST00000550208 LINC01006Q8NI28 216 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 SLC25A33Q9BSK2 321 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 MRPL20Q9BYC9 149 aaKnown RBP18.01■□□□□ 0.47
BRF1-216ENST00000550208 C16orf95Q9H693 158 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 BEX1Q9HBH7 125 aa18.01■□□□□ 0.47
BRF1-216ENST00000550208 CLPSL1A2RUU4 121 aa18■□□□□ 0.47
BRF1-216ENST00000550208 TXNL1O43396 289 aa18■□□□□ 0.47
BRF1-216ENST00000550208 PROP1O75360 226 aa18■□□□□ 0.47
BRF1-216ENST00000550208 OR2F2O95006 317 aa18■□□□□ 0.47
BRF1-216ENST00000550208 OR8U9P0C7N5 309 aa18■□□□□ 0.47
BRF1-216ENST00000550208 CD1BP29016 333 aa18■□□□□ 0.47
BRF1-216ENST00000550208 BLCAPP62952 87 aa18■□□□□ 0.47
BRF1-216ENST00000550208 EBI3Q14213 229 aa18■□□□□ 0.47
BRF1-216ENST00000550208 SNX29P2Q8IUI4 249 aa18■□□□□ 0.47
BRF1-216ENST00000550208 OR8U1Q8NH10 309 aa18■□□□□ 0.47
BRF1-216ENST00000550208 EAF1Q96JC9 268 aaPredicted RBP18■□□□□ 0.47
BRF1-216ENST00000550208 S1PR3Q99500 378 aa18■□□□□ 0.47
BRF1-216ENST00000550208 NABP2Q9BQ15 211 aa18■□□□□ 0.47
BRF1-216ENST00000550208 NPFFR1Q9GZQ6 430 aa18■□□□□ 0.47
BRF1-216ENST00000550208 GHITMQ9H3K2 345 aa18■□□□□ 0.47
BRF1-216ENST00000550208 EXTL2Q9UBQ6 330 aa18■□□□□ 0.47
BRF1-216ENST00000550208 RSL24D1Q9UHA3 163 aaKnown RBP18■□□□□ 0.47
BRF1-216ENST00000550208 SIGLEC9Q9Y336 463 aa18■□□□□ 0.47
BRF1-216ENST00000550208 MMP24Q9Y5R2 645 aa18■□□□□ 0.47
BRF1-216ENST00000550208 RGS5O15539 181 aa17.99■□□□□ 0.47
BRF1-216ENST00000550208 TMEM11P17152 192 aa17.99■□□□□ 0.47
BRF1-216ENST00000550208 Q6ZS46 218 aa17.99■□□□□ 0.47
BRF1-216ENST00000550208 C16orf82Q7Z2V1 217 aa17.99■□□□□ 0.47
BRF1-216ENST00000550208 SNAPC3Q92966 411 aa17.99■□□□□ 0.47
BRF1-216ENST00000550208 SLIRPQ9GZT3 109 aaKnown RBP17.99■□□□□ 0.47
BRF1-216ENST00000550208 ZNF221Q9UK13 617 aa17.99■□□□□ 0.47
BRF1-216ENST00000550208 J3QRK9 145 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 CT45A6P0DMU7 189 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 CT45A5P0DMU8 189 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 CT45A7P0DMV0 189 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 NFYAP23511 347 aaPredicted RBP17.98■□□□□ 0.47
BRF1-216ENST00000550208 GPR12P47775 334 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 LSAMPQ13449 338 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 LAX1Q8IWV1 398 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 OR4C13Q8NGP0 309 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 OR2T10Q8NGZ9 312 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 IFT46Q9NQC8 304 aa17.98■□□□□ 0.47
BRF1-216ENST00000550208 A0A1B0GUS0 222 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 AMY1AP04745 511 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 AMY2AP04746 511 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 ARPC4P59998 168 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 FAM71F2Q6NXP2 309 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 C3orf56Q8N813 242 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 GPX8Q8TED1 209 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 RANBP3Q9H6Z4 567 aaPredicted RBP17.97■□□□□ 0.47
BRF1-216ENST00000550208 ZNF702PQ9H963 129 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 ANAPC10Q9UM13 185 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 GAB2Q9UQC2 676 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 RNF114Q9Y508 228 aa17.97■□□□□ 0.47
BRF1-216ENST00000550208 RBM7Q9Y580 266 aaKnown RBP17.97■□□□□ 0.47
BRF1-216ENST00000550208 STAB1Q9NY15 2570 aa17.96■□□□□ 0.47
BRF1-216ENST00000550208 SH2D7A6NKC9 451 aaPredicted RBP17.96■□□□□ 0.47
BRF1-216ENST00000550208 MOSP00540 346 aa17.96■□□□□ 0.47
BRF1-216ENST00000550208 LINC00205P59089 165 aa17.96■□□□□ 0.47
BRF1-216ENST00000550208 GLDNQ6ZMI3 551 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms