RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 C9orf135Q5VTT2 229 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 OR8G2PQ6IF36 304 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 ACSM6Q6P461 480 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 COLCA1Q6ZS62 124 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 ABHD3Q8WU67 409 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 ACY3Q96HD9 319 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 ATG101Q9BSB4 218 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 MRPL37Q9BZE1 423 aaKnown RBP11.65□□□□□ -0.55
HDAC7-228ENST00000548938 A0A1W2PR80 420 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 FAM3BP58499 235 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-228ENST00000548938 LPAL2Q16609 132 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 CEACAM21Q3KPI0 293 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 CENPVQ7Z7K6 275 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-228ENST00000548938 SAXO1Q8IYX7 474 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 OR10V1Q8NGI7 309 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 OR10D3Q8NH80 312 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 UBALD1Q8TB05 177 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 IFI44Q8TCB0 444 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 LSM10Q969L4 123 aaKnown RBP11.64□□□□□ -0.55
HDAC7-228ENST00000548938 REPIN1Q9BWE0 567 aaKnown RBP11.64□□□□□ -0.55
HDAC7-228ENST00000548938 PLA2G3Q9NZ20 509 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 CELSR3Q9NYQ7 3312 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 TRAV24A0A0B4J272 114 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 ACTL10Q5JWF8 245 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 RIPPLY2Q5TAB7 128 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 MKXQ8IYA7 352 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 PRR18Q8N4B5 295 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 PSMF1Q92530 271 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 OR51I2Q9H344 312 aa11.64□□□□□ -0.55
HDAC7-228ENST00000548938 ZNF552Q9H707 407 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-228ENST00000548938 TTC28Q96AY4 2481 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 B4E171 279 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-228ENST00000548938 PSMB3P49720 205 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 ZNF585BQ52M93 769 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 MRPL41Q8IXM3 137 aaKnown RBP11.63□□□□□ -0.55
HDAC7-228ENST00000548938 OR4F5Q8NH21 305 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 OR4F4Q96R69 305 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 ARHGAP21Q5T5U3 1957 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 NCKAP5O14513 1909 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 A0A096LPE4 126 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 A0A1W2PPZ6 126 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 RFPL3SP0C7P2 107 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 PAX5Q02548 391 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 TCEAL6Q6IPX3 200 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 MRPL21Q7Z2W9 205 aaKnown RBP11.63□□□□□ -0.55
HDAC7-228ENST00000548938 RPS19BP1Q86WX3 136 aaKnown RBP11.63□□□□□ -0.55
HDAC7-228ENST00000548938 KCNS2Q9ULS6 477 aa11.63□□□□□ -0.55
HDAC7-228ENST00000548938 C5orf49A4QMS7 147 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 TMEM250H0YL14 139 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 CASP6P55212 293 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 TEX38Q6PEX7 206 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 TMEM18Q96B42 140 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 TMEM68Q96MH6 324 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 SNHG12Q9BXW3 62 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 RIMS4Q9H426 269 aaPredicted RBP11.62□□□□□ -0.55
HDAC7-228ENST00000548938 TMEM9BQ9NQ34 198 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 M0R296 226 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 CER1O95813 267 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 GYPAP02724 150 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 SRD5A2P31213 254 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 C21orf62-AS1Q17RA5 79 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 WIPI1Q5MNZ9 446 aaPredicted RBP11.62□□□□□ -0.55
HDAC7-228ENST00000548938 OR5T1Q8NG75 326 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 OR2T10Q8NGZ9 312 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 PARD6GQ9BYG4 376 aaPredicted RBP11.62□□□□□ -0.55
HDAC7-228ENST00000548938 WDR54Q9H977 334 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 CBLN4Q9NTU7 201 aa11.62□□□□□ -0.55
HDAC7-228ENST00000548938 GGCTO75223 188 aaKnown RBP11.61□□□□□ -0.55
HDAC7-228ENST00000548938 CLDN1O95832 211 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 FGF5P12034 268 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 RAB4BP61018 213 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 OR6C3Q9NZP0 311 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 TRBV6-6A0A0A6YYG2 114 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 PIGBOS1A0A0B4J2F0 54 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 WDR1O75083 606 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 DEFA4P12838 97 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 IGFBP7Q16270 282 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 DLL3Q9NYJ7 618 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 RBM7Q9Y580 266 aaKnown RBP11.61□□□□□ -0.55
HDAC7-228ENST00000548938 FREM1Q5H8C1 2179 aa11.61□□□□□ -0.55
HDAC7-228ENST00000548938 CTXND1A0A1B0GTU2 59 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 ZNF503-AS2A6NEH8 195 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 DEGS1O15121 323 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 LILRA1O75019 489 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 TRAPPC6AO75865 159 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 NGFP01138 241 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 G0S2P27469 103 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 MLF1P58340 268 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 ARF1P84077 181 aaKnown RBP11.6□□□□□ -0.55
HDAC7-228ENST00000548938 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 ACOT6Q3I5F7 207 aaPredicted RBP11.6□□□□□ -0.55
HDAC7-228ENST00000548938 KCNE4Q8WWG9 221 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 SGCZQ96LD1 299 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 DIDO1Q9BTC0 2240 aaKnown RBP11.6□□□□□ -0.55
HDAC7-228ENST00000548938 A0A1B0GUS0 222 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 KLF7O75840 302 aaPredicted RBP11.6□□□□□ -0.55
HDAC7-228ENST00000548938 WNT2P09544 360 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 CHRNA7P36544 502 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms