RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 SGCEO43556 437 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 ASS1P00966 412 aaKnown RBP0.78□□□□□ -2.28
CCDC38-206ENST00000548771 APOA1P02647 267 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 LIMS3P0CW19 117 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 LIMS4P0CW20 117 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 NPPCP23582 126 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 SERPINB10P48595 397 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 RPL14P50914 215 aaKnown RBP0.78□□□□□ -2.28
CCDC38-206ENST00000548771 FGF12P61328 243 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 FAM3AP98173 230 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 RELAQ04206 551 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 C1DQ13901 141 aaKnown RBP0.78□□□□□ -2.28
CCDC38-206ENST00000548771 PSG3Q16557 428 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 TMEM249Q2WGJ8 235 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.78□□□□□ -2.28
CCDC38-206ENST00000548771 PPWD1Q96BP3 646 aaKnown RBP0.78□□□□□ -2.28
CCDC38-206ENST00000548771 TAMM41Q96BW9 452 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 TMEM56Q96MV1 263 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 SIKE1Q9BRV8 207 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 MED28Q9H204 178 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 GLS2Q9UI32 602 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 HHLA2Q9UM44 414 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 SNX10Q9Y5X0 201 aa0.78□□□□□ -2.28
CCDC38-206ENST00000548771 NOTCH1P46531 2555 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 FBN2P35556 2912 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 TRAV41A0A0B4J266 112 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 MDFIC2A0A1B0GVS7 189 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 RFPL4AA6NLU0 287 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 RFPL4AL1F8VTS6 287 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 UBE2L6O14933 153 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 UGT2B11O75310 529 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 PSMG1O95456 288 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 IGHV1-69P01742 117 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 OR13C7P0DN81 318 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 ADORA1P30542 326 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 LCN1P31025 176 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 OPRM1P35372 400 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 TAS2R45P59539 299 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 RAB8AP61006 207 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 SLC38A11Q08AI6 406 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 STX3Q13277 289 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 OR4D1Q15615 310 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 PABPC1L2AQ5JQF8 200 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 TMEM31Q5JXX7 168 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 XKRXQ6PP77 449 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 AMTNQ6UX39 209 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 OR8B12Q8NGG6 310 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 OR5J2Q8NH18 312 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 OR51H1Q8NH63 302 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 FAM210AQ96ND0 272 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 SERPINB11Q96P15 392 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 ACBD6Q9BR61 282 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 BABAM2Q9NXR7 383 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 PLCH2O75038 1416 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 ADAMTSL1Q8N6G6 1762 aa0.77□□□□□ -2.29
CCDC38-206ENST00000548771 OR5K4A6NMS3 321 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 OR11H12B2RN74 326 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 SLC17A3O00476 420 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 LIN7AO14910 233 aaPredicted RBP0.76□□□□□ -2.29
CCDC38-206ENST00000548771 ARL6IP5O75915 188 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 FADS2O95864 444 aaKnown RBP0.76□□□□□ -2.29
CCDC38-206ENST00000548771 S100A9P06702 114 aaKnown RBP0.76□□□□□ -2.29
CCDC38-206ENST00000548771 CD7P09564 240 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 CCL3P10147 92 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 CRYBB3P26998 211 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 AGTR1P30556 359 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 LINC00313P59037 77 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 KRTAP10-4P60372 401 aaPredicted RBP0.76□□□□□ -2.29
CCDC38-206ENST00000548771 TBC1D28Q2M2D7 210 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 FAM201AQ5SY85 155 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 SLC35E3Q7Z769 313 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 LHFPL1Q86WI0 220 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 SLC13A5Q86YT5 568 aaPredicted RBP0.76□□□□□ -2.29
CCDC38-206ENST00000548771 PLCZ1Q86YW0 608 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 OR11H2Q8NH07 326 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 SPACA4Q8TDM5 124 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 C10orf105Q8TEF2 133 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 TNFAIP8L1Q8WVP5 186 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 RORBQ92753 470 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 UGT2B28Q9BY64 529 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 POFUT2Q9Y2G5 429 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 STK38LQ9Y2H1 464 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.76□□□□□ -2.29
CCDC38-206ENST00000548771 DSCAML1Q8TD84 2053 aa0.76□□□□□ -2.29
CCDC38-206ENST00000548771 KDM5BQ9UGL1 1544 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 TMSB15BA0A087X1C1 80 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 A8MUN3 132 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 F5H5K5 113 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 IGLV3-27P01718 113 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 HBZP02008 142 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 UCHL1P09936 223 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 ZNF705DP0CH99 300 aaPredicted RBP0.75□□□□□ -2.29
CCDC38-206ENST00000548771 ZNF705BP0CI00 300 aaPredicted RBP0.75□□□□□ -2.29
CCDC38-206ENST00000548771 SLC35E2BP0CK96 405 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 ZNF728P0DKX0 622 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 PVALBP20472 110 aaPredicted RBP0.75□□□□□ -2.29
CCDC38-206ENST00000548771 XCL1P47992 114 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 TMEM258P61165 79 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 EXOC3L4Q17RC7 722 aa0.75□□□□□ -2.29
CCDC38-206ENST00000548771 FBXO48Q5FWF7 155 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms