RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CDX1P47902 265 aaPredicted RBP12.85□□□□□ -0.35
SSH1-208ENST00000548522 ZNF260Q3ZCT1 412 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 IDNKQ5T6J7 187 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 ASPHD1Q5U4P2 390 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 PYHIN1Q6K0P9 492 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 MUC7Q8TAX7 377 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 TNFAIP8L1Q8WVP5 186 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 NCOR1P1Q9H4R4 102 aa12.85□□□□□ -0.35
SSH1-208ENST00000548522 ZNF256Q9Y2P7 627 aaPredicted RBP12.85□□□□□ -0.35
SSH1-208ENST00000548522 IGHV3-43A0A0B4J1X8 118 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 SLC31A2O15432 143 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 MAGEB3O15480 346 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 GAPDHP04406 335 aaKnown RBP12.84□□□□□ -0.35
SSH1-208ENST00000548522 IGHV3-43DP0DP04 118 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 RANBP1P43487 201 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 PAX5Q02548 391 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 SUMF2Q8NBJ7 301 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 C4orf3Q8WVX3 66 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 RGP1Q92546 391 aaPredicted RBP12.84□□□□□ -0.35
SSH1-208ENST00000548522 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 S1PR3Q99500 378 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 PDCD1LG2Q9BQ51 273 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 DPCDQ9BVM2 203 aaPredicted RBP12.84□□□□□ -0.35
SSH1-208ENST00000548522 GNB4Q9HAV0 340 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 TBC1D24Q9ULP9 559 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 ETV7Q9Y603 341 aa12.84□□□□□ -0.35
SSH1-208ENST00000548522 hCG_2014768A0A024R1R8 64 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 C15orf65H3BRN8 121 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 CTDSPLO15194 276 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 LY86O95711 162 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 IGHG4P01861 327 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 ELANEP08246 267 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 FSTP19883 344 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 PSMB8P28062 276 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 CHATP28329 748 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 F2RL1P55085 397 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 PITPNAQ00169 270 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 BAK1Q16611 211 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 FAM27D1Q5T7N8 215 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 SNX29P2Q8IUI4 249 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 SBSPONQ8IVN8 264 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 PXT1Q8NFP0 134 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 OR10A7Q8NGE5 316 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 OR2T10Q8NGZ9 312 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 RTN4IP1Q8WWV3 396 aaPredicted RBP12.83□□□□□ -0.36
SSH1-208ENST00000548522 ST6GALNAC6Q969X2 333 aa12.83□□□□□ -0.36
SSH1-208ENST00000548522 IFITM5A6NNB3 132 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 SDCBPO00560 298 aaPredicted RBP12.82□□□□□ -0.36
SSH1-208ENST00000548522 CD37P11049 281 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 SLC2A2P11168 524 aaPredicted RBP12.82□□□□□ -0.36
SSH1-208ENST00000548522 PYDC2Q56P42 97 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 SERPINA12Q8IW75 414 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 DRAXINQ8NBI3 349 aaPredicted RBP12.82□□□□□ -0.36
SSH1-208ENST00000548522 OR11H1Q8NG94 326 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 OR5D14Q8NGL3 314 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 OR13C5Q8NGS8 318 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 CCDC107Q8WV48 283 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 TSEN15Q8WW01 171 aaKnown RBP12.82□□□□□ -0.36
SSH1-208ENST00000548522 RCHY1Q96PM5 261 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 OR5B12Q96R08 314 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 KLK15Q9H2R5 256 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 TAS2R4Q9NYW5 299 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 EXTL2Q9UBQ6 330 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 DHDHQ9UQ10 334 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 V9GY05 133 aa12.82□□□□□ -0.36
SSH1-208ENST00000548522 FAM25AB3EWG3 89 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 FAM25CB3EWG5 89 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 FAM25GB3EWG6 89 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 OR7C1O76099 320 aaPredicted RBP12.81□□□□□ -0.36
SSH1-208ENST00000548522 HTR3BO95264 441 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 MOSP00540 346 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 ELK1P19419 428 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 VDAC1P21796 283 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 SOX2P48431 317 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 KCNJ3P48549 501 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 OR10A3P58181 314 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 GNB1P62873 340 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 MRPS10P82664 201 aaKnown RBP12.81□□□□□ -0.36
SSH1-208ENST00000548522 IL18Q14116 193 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 RSU1Q15404 277 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 UBE2NLQ5JXB2 153 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 TRIQKQ629K1 86 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 ZNF529Q6P280 563 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 OVCH2Q7RTZ1 564 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 Q8N402 240 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 LINC00311Q8N616 119 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 Q8NFD4 153 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 MYOZ3Q8TDC0 251 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 ARL11Q969Q4 196 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 CYYR1Q96J86 154 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 GPER1Q99527 375 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 RASL11BQ9BPW5 248 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 GON7Q9BXV9 100 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 GFOD1Q9NXC2 390 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 ST3GAL6Q9Y274 331 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 SMAD5-AS1Q9Y6J3 95 aa12.81□□□□□ -0.36
SSH1-208ENST00000548522 HYDINQ4G0P3 5121 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms