RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MRPL37Q9BZE1 423 aaKnown RBP10.68□□□□□ -0.7
SCAF11-209ENST00000547018 TMEM218A2RU14 115 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 TUBAL3A6NHL2 446 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 SOX15O60248 233 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 UCP3P55916 312 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 OR2B8PP59922 312 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 PUSL1Q8N0Z8 303 aaKnown RBP10.67□□□□□ -0.7
SCAF11-209ENST00000547018 PHYHIPLQ96FC7 376 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 RSG1Q9BU20 258 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 PLEKHF2Q9H8W4 249 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 C17orf98A8MV24 154 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 CRYABP02511 175 aaKnown RBP10.67□□□□□ -0.7
SCAF11-209ENST00000547018 NDUFB7P17568 137 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 ATP6V0CP27449 155 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 SELENOVP59797 346 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 DOLPP1Q86YN1 238 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 Q8IYB0 196 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 SFT2D1Q8WV19 159 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 CCL17Q92583 94 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 PLSCR2Q9NRY7 297 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 FAM212BQ9NTI7 297 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-209ENST00000547018 CLN8Q9UBY8 286 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 POMT1Q9Y6A1 747 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 PKD1L2Q7Z442 2459 aa10.67□□□□□ -0.7
SCAF11-209ENST00000547018 GYPAP02724 150 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 Q8NFD4 153 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 BOD1Q96IK1 185 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 AIFM2Q9BRQ8 373 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 NKX6-2Q9C056 277 aaPredicted RBP10.66□□□□□ -0.7
SCAF11-209ENST00000547018 IGKV1-39P01597 117 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 IGKV1D-39P04432 117 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 FBP1P09467 338 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 ADCYAP1P18509 176 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 KCNJ3P48549 501 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 ERVK11-1P61568 191 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 MST1LQ2TV78 715 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 NEUROG1Q92886 237 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 WIPI2Q9Y4P8 454 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 HCFC1P51610 2035 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 RNASEK-C17orf49H0YIS7 233 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 FCGR3BO75015 233 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 S1PR2O95136 353 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 CGAP01215 116 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 CD55P08174 381 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 SNRNP70P08621 437 aaKnown RBP10.66□□□□□ -0.7
SCAF11-209ENST00000547018 SFTA3P0C7M3 94 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 DEFA4P12838 97 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 UCP1P25874 307 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 NPBWR1P48145 328 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 FGF8P55075 233 aaPredicted RBP10.66□□□□□ -0.7
SCAF11-209ENST00000547018 PJVKQ0ZLH3 352 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 RTP5Q14D33 572 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 UQCC1Q9NVA1 299 aa10.66□□□□□ -0.7
SCAF11-209ENST00000547018 A0A0G2JNJ9 132 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 FAM90A27PA6NNH2 459 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 TNFAIP6P98066 277 aaPredicted RBP10.65□□□□□ -0.7
SCAF11-209ENST00000547018 FAM216BQ8N7L0 139 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 OR4D5Q8NGN0 318 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 ZDHHC16Q969W1 377 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 RARRES2Q99969 163 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 Q9UFV3 132 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 M0R1X1 148 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 TMPRSS2O15393 492 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 IGKV1-5P01602 117 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 SRPXP78539 464 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 CCL20P78556 96 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 ZNF146Q15072 292 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 STX12Q86Y82 276 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 FAM185AQ8N0U4 392 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 GCSAMQ8N6F7 178 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 PSENENQ9NZ42 101 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 RAXQ9Y2V3 346 aa10.65□□□□□ -0.7
SCAF11-209ENST00000547018 IGKV1D-17A0A075B6S4 117 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 MBD3L4A6NDZ8 208 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-209ENST00000547018 MBD3L3A6NE82 208 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-209ENST00000547018 MBD3L5A6NJ08 208 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-209ENST00000547018 TAAR5O14804 337 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 IFNA17P01571 189 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 GUSBP1Q15486 140 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 MBD3L2Q8NHZ7 208 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-209ENST00000547018 KCNJ16Q9NPI9 418 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 SMCO3A2RU48 225 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 CEBPZOSA8MTT3 80 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 H0Y980 276 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 SPINT2O43291 252 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 ZFP82Q8N141 532 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 H1FXQ92522 213 aaKnown RBP10.64□□□□□ -0.71
SCAF11-209ENST00000547018 PUS1Q9Y606 427 aaKnown RBP eCLIP10.64□□□□□ -0.71
SCAF11-209ENST00000547018 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 ATG12O94817 140 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 P2RY1P47900 373 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 DLX1P56177 255 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 RPL23AP62750 156 aaKnown RBP10.64□□□□□ -0.71
SCAF11-209ENST00000547018 ZNF585BQ52M93 769 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 NMSQ5H8A3 153 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 TMEM56Q96MV1 263 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 TMEM56-RWDD3S4R434 201 aa10.64□□□□□ -0.71
SCAF11-209ENST00000547018 A8MXE2 369 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms