RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 TXNL4BQ9NX01 149 aaKnown RBP3.73□□□□□ -1.81
NPAS3-204ENST00000546849 BABAM2Q9NXR7 383 aa3.73□□□□□ -1.81
NPAS3-204ENST00000546849 CKLFQ9UBR5 152 aa3.73□□□□□ -1.81
NPAS3-204ENST00000546849 ZNF443Q9Y2A4 671 aaPredicted RBP3.73□□□□□ -1.81
NPAS3-204ENST00000546849 NUBP2Q9Y5Y2 271 aa3.73□□□□□ -1.81
NPAS3-204ENST00000546849 SLC22A7Q9Y694 548 aa3.73□□□□□ -1.81
NPAS3-204ENST00000546849 KCNE3Q9Y6H6 103 aa3.73□□□□□ -1.81
NPAS3-204ENST00000546849 TENM4Q6N022 2769 aa3.73□□□□□ -1.81
NPAS3-204ENST00000546849 NUP214P35658 2090 aaPredicted RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CCDC88CQ9P219 2028 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 DSPP15924 2871 aaKnown RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 LOC400499M0QZD8 3231 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 TRAV1-2A0A0B4J238 106 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 IGHV5-10-1A0A0J9YXX1 117 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 A0A0J9YY10 115 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 LRRN3E7EW58 273 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 PRAMEF26H0Y7S4 382 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 BET1O15155 118 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CHP2O43745 196 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 KALRNO60229 2985 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 NDUFB2O95178 105 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 ETHE1O95571 254 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 GPR75O95800 540 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CD2P06729 351 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CTSLP07711 333 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 PSKH1P11801 424 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CPMP14384 443 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CELP19835 753 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 TCN2P20062 427 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 DTYMKP23919 212 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 FKBP2P26885 142 aaKnown RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 STOMP27105 288 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 GNG2P59768 71 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 UBE2NP61088 152 aaKnown RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 RPS15P62841 145 aaKnown RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 SSBP1Q04837 148 aaKnown RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 EIF4EBP1Q13541 118 aaPredicted RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 ELOCQ15369 112 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 SHHQ15465 462 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 MAPK14Q16539 360 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 KRTAP13-3Q3SY46 172 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 LINC00483Q53H64 154 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 TMEM236Q5W0B7 351 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 RPL22L1Q6P5R6 122 aaKnown RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 DNM1P34Q6PK57 102 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CD200R1LQ6Q8B3 271 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 GKN2Q86XP6 184 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CALHM1Q8IU99 346 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 TCTE3Q8IZS6 198 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 TOMM5Q8N4H5 51 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 NOXO1Q8NFA2 376 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 OR4E2Q8NGC2 313 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 UBALD1Q8TB05 177 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 TMEM239Q8WW34 195 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 FGF13Q92913 245 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 RAB8BQ92930 207 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 TMEM230Q96A57 120 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 S100A16Q96FQ6 103 aaKnown RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 OPALINQ96PE5 141 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 ERMAPQ96PL5 475 aaPredicted RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 MED28Q9H204 178 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 OR51E2Q9H255 320 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 TMEM185BQ9H7F4 350 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 C12orf10Q9HB07 376 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CRLF2Q9HC73 371 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CMC2Q9NRP2 79 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 MCUBQ9NWR8 336 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 DNAJC27Q9NZQ0 273 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 ZNRD1Q9P1U0 126 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 CCL26Q9Y258 94 aa3.72□□□□□ -1.81
NPAS3-204ENST00000546849 YTHDF2Q9Y5A9 579 aaKnown RBP3.72□□□□□ -1.81
NPAS3-204ENST00000546849 FBN3Q75N90 2809 aa3.71□□□□□ -1.81
NPAS3-204ENST00000546849 OBSL1O75147 1896 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 NUP210Q8TEM1 1887 aaPredicted RBP3.71□□□□□ -1.82
NPAS3-204ENST00000546849 PIGBOS1A0A0B4J2F0 54 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 CPSF4LA6NMK7 179 aaKnown RBP3.71□□□□□ -1.82
NPAS3-204ENST00000546849 INMT-MINDY4F8WBC2 141 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 H0YC42 278 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 LYRM1O43325 122 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 UBL3O95164 117 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 SOX14O95416 240 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 SOD1P00441 154 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 IFI30P13284 250 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 NPY1RP25929 384 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 ACTR1BP42025 376 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 GUCA1AP43080 201 aaPredicted RBP3.71□□□□□ -1.82
NPAS3-204ENST00000546849 ZNF138P52744 262 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 CTBP2P56545 445 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 RAB38P57729 211 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 FAM53BQ14153 422 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 CDK10Q15131 360 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 STK11Q15831 433 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 LRRC26Q2I0M4 334 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 YIF1BQ5BJH7 314 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 PIP5KL1Q5T9C9 394 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 TMEM215Q68D42 235 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 THOC7Q6I9Y2 204 aaKnown RBP3.71□□□□□ -1.82
NPAS3-204ENST00000546849 TMEM53Q6P2H8 277 aa3.71□□□□□ -1.82
NPAS3-204ENST00000546849 DUX4L9Q6RFH8 374 aaPredicted RBP3.71□□□□□ -1.82
NPAS3-204ENST00000546849 ZNF322Q6U7Q0 402 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms