RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 DUX5Q96PT3 197 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 GABARAPH6UMI1 98 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 CTDSPLO15194 276 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 FCER2P06734 321 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 OR8U9P0C7N5 309 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 PAX6P26367 422 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 RCVRNP35243 200 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 GPR12P47775 334 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 RAB13P51153 203 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 SSBP1Q04837 148 aaKnown RBP11.1□□□□□ -0.63
PTCH1-213ENST00000546820 FAM71F2Q6NXP2 309 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 FAM131AQ6UXB0 335 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 LIAT1Q6ZQX7 453 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 MOB3BQ86TA1 216 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 THNSL2Q86YJ6 484 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 H1FOOQ8IZA3 346 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-213ENST00000546820 OR5H2Q8NGV7 314 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 OR8U1Q8NH10 309 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 RTN4IP1Q8WWV3 396 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-213ENST00000546820 TMEM158Q8WZ71 300 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 AGMATQ9BSE5 352 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 RAB18Q9NP72 206 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 VPREB3Q9UKI3 123 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 ANAPC10Q9UM13 185 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 OR2W1Q9Y3N9 320 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 JMJD1CQ15652 2540 aa11.1□□□□□ -0.63
PTCH1-213ENST00000546820 ANK3Q12955 4377 aaKnown RBP11.09□□□□□ -0.63
PTCH1-213ENST00000546820 IGHV1-3A0A0C4DH29 117 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 SLC22A5O76082 557 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 OR5H8P0DN80 308 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTCH1-213ENST00000546820 REG1BP48304 166 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 LUMP51884 338 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-213ENST00000546820 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
PTCH1-213ENST00000546820 ACTBL2Q562R1 376 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 SPANXN2Q5MJ10 180 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 OR52I2Q8NH67 350 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 CAPSLQ8WWF8 208 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 SNAPC3Q92966 411 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 ABHD14BQ96IU4 210 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 CHIAQ9BZP6 476 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 IFI27L2Q9H2X8 130 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 MTFP1Q9UDX5 166 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 RNF150Q9ULK6 438 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 GAB2Q9UQC2 676 aa11.09□□□□□ -0.63
PTCH1-213ENST00000546820 NF1P21359 2839 aa11.08□□□□□ -0.63
PTCH1-213ENST00000546820 SAA2-SAA4A0A096LPE2 208 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 TIMM23O14925 209 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 PMP2P02689 132 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 SAA2P0DJI9 122 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-213ENST00000546820 NFYAP23511 347 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-213ENST00000546820 HLA-DMAP28067 261 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 CD1BP29016 333 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 FCGR2CP31995 323 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 DIAPH2-AS1Q14236 149 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 LY6EQ16553 131 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 RNASE12Q5GAN4 147 aaKnown RBP11.08□□□□□ -0.64
PTCH1-213ENST00000546820 ZNF833PQ6ZTB9 187 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 LYSMD2Q8IV50 215 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 ODF3L1Q8IXM7 274 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 DRAM1Q8N682 238 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-213ENST00000546820 OR6Q1Q8NGQ2 317 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 PIFOQ8TCI5 191 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 GIMAP1Q8WWP7 306 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 SOSTQ9BQB4 213 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 PARP12Q9H0J9 701 aaKnown RBP11.08□□□□□ -0.64
PTCH1-213ENST00000546820 TAS2R8Q9NYW2 309 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 EHFQ9NZC4 300 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 KLK11Q9UBX7 282 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
PTCH1-213ENST00000546820 A0A1W2PPI3 338 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 FAM181BA6NEQ2 426 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 ZNF736B4DX44 427 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-213ENST00000546820 GSTZ1O43708 216 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-213ENST00000546820 GPR137BO60478 399 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 IFNA6P05013 189 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 TBPP20226 339 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 RFX2P48378 723 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 TSPAN5P62079 268 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 DYRK1AQ13627 763 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 HES1Q14469 280 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 PYDC2Q56P42 97 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 DHRS11Q6UWP2 260 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 OVCH2Q7RTZ1 564 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 CCDC190Q86UF4 302 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 OR6F1Q8NGZ6 308 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 OR56B4Q8NH76 319 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 SMIM4Q8WVI0 70 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 AKR1E2Q96JD6 320 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 OR2D2Q9H210 308 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 ZNF107Q9UII5 783 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-213ENST00000546820 C2CD3Q4AC94 2353 aa11.07□□□□□ -0.64
PTCH1-213ENST00000546820 A6NDX4 124 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 FAM90A9PA6NNJ1 464 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 J3QRK9 145 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 TUSC2O75896 110 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 CSF1P09603 554 aa11.06□□□□□ -0.64
PTCH1-213ENST00000546820 CD24P25063 80 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms