RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 TIMM23O14925 209 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 LANCL1O43813 399 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 SAA2P0DJI9 122 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-211ENST00000546215 BRS3P32247 399 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 OR3A3P47888 321 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 ARPC4P59998 168 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 LY6EQ16553 131 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 OR5AP2Q8NGF4 316 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 CFHR4Q92496 578 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 ABHD14BQ96IU4 210 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 ZNF251Q9BRH9 671 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 GHITMQ9H3K2 345 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 PIPOXQ9P0Z9 390 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 TCF19Q9Y242 345 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 FAM181BA6NEQ2 426 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 FAM90A9PA6NNJ1 464 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 RAB29O14966 203 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 CD24P25063 80 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 HABP2Q14520 560 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-211ENST00000546215 KRTAP21-3Q3LHN1 58 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 PYHIN1Q6K0P9 492 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 CCBE1Q6UXH8 406 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-211ENST00000546215 ZNF833PQ6ZTB9 187 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 TGIF2LXQ8IUE1 241 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 LYSMD2Q8IV50 215 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 DRAM1Q8N682 238 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 OR52I2Q8NH67 350 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 RNF150Q9ULK6 438 aa16.69■□□□□ 0.26
SCARB1-211ENST00000546215 GPR137BO60478 399 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 OR8U9P0C7N5 309 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 NFYAP23511 347 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-211ENST00000546215 IL18Q14116 193 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 FBLN7Q53RD9 439 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 OR8U1Q8NH10 309 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 OR56B4Q8NH76 319 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 NECAP2Q9NVZ3 263 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 RABL2AQ9UBK7 228 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-211ENST00000546215 KLK11Q9UBX7 282 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 RABL2BQ9UNT1 228 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 A6NDX4 124 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 FABP12A6NFH5 140 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 TXNL1O43396 289 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 S100A5P33763 92 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 RNASE12Q5GAN4 147 aaKnown RBP16.68■□□□□ 0.26
SCARB1-211ENST00000546215 FAM71F2Q6NXP2 309 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 MOB3BQ86TA1 216 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 MTFP1Q9UDX5 166 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 COL6A5A8TX70 2615 aa16.68■□□□□ 0.26
SCARB1-211ENST00000546215 GABARAPH6UMI1 98 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 CTDSPLO15194 276 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 PROP1O75360 226 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 TUSC2O75896 110 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 OR5H8P0DN80 308 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 RCVRNP35243 200 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 DGCR2P98153 550 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 CDK10Q15131 360 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 RPL39P5Q59GN2 51 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 OVCH2Q7RTZ1 564 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 THNSL2Q86YJ6 484 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-211ENST00000546215 FCAMRQ8WWV6 532 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 S1PR3Q99500 378 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 BATF3Q9NR55 127 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 PITPNC1Q9UKF7 332 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 OR2W1Q9Y3N9 320 aa16.67■□□□□ 0.26
SCARB1-211ENST00000546215 HLA-DMAP28067 261 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 RFX2P48378 723 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 RPL15P61313 204 aaKnown RBP16.66■□□□□ 0.26
SCARB1-211ENST00000546215 MRPS10P82664 201 aaKnown RBP16.66■□□□□ 0.26
SCARB1-211ENST00000546215 LIAT1Q6ZQX7 453 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 CCDC190Q86UF4 302 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 TMEM219Q86XT9 240 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 CAPSLQ8WWF8 208 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 TMEM158Q8WZ71 300 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 OR2D2Q9H210 308 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 ZNF221Q9UK13 617 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 GAB2Q9UQC2 676 aa16.66■□□□□ 0.26
SCARB1-211ENST00000546215 IGHV3-72A0A0B4J1Y9 119 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 CHST1O43916 411 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 RBBP9O75884 186 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 PMP2P02689 132 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 SNRNP70P08621 437 aaKnown RBP16.65■□□□□ 0.26
SCARB1-211ENST00000546215 FCGR2CP31995 323 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 GPR12P47775 334 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 TAS2R46P59540 309 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 OR6Q1Q8NGQ2 317 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 SMIM4Q8WVI0 70 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 TAF15Q92804 592 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■□□ 15
SCARB1-211ENST00000546215 NABP2Q9BQ15 211 aa16.65■□□□□ 0.26
SCARB1-211ENST00000546215 MRPL20Q9BYC9 149 aaKnown RBP16.65■□□□□ 0.26
SCARB1-211ENST00000546215 RBM7Q9Y580 266 aaKnown RBP16.65■□□□□ 0.26
SCARB1-211ENST00000546215 ZNF736B4DX44 427 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-211ENST00000546215 J3QRK9 145 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 FAM106CPP0CH98 169 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 CD1BP29016 333 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 HRH1P35367 487 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 DYRK1AQ13627 763 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 EBI3Q14213 229 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 FAM131AQ6UXB0 335 aa16.64■□□□□ 0.25
SCARB1-211ENST00000546215 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms