RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CD3DP04234 171 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 APELAP0DMC3 54 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 APOBEC3AP31941 199 aaPredicted RBP7.45□□□□□ -1.22
CLIP1-218ENST00000545889 PRDX2P32119 198 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 ARHGAP5-AS1Q96IT6 56 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 C2orf88Q9BSF0 95 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 RAB18Q9NP72 206 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 STARD10Q9Y365 291 aa7.45□□□□□ -1.22
CLIP1-218ENST00000545889 PPIAL4CA0A0B4J2A2 164 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 J3KRW8 73 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 DUS4LO95620 317 aaKnown RBP7.44□□□□□ -1.22
CLIP1-218ENST00000545889 METTL15P1P0C7V9 234 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 PPIAL4GP0DN37 164 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 HTR1DP28221 377 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 ID1P41134 155 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 BAGE3Q86Y29 109 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 BAGE2Q86Y30 109 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 OR4C5Q8NGB2 326 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 OR8B12Q8NGG6 310 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 RAB24Q969Q5 203 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 C7orf69Q9H7B7 122 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 LSM2Q9Y333 95 aaKnown RBP7.44□□□□□ -1.22
CLIP1-218ENST00000545889 CSAG2Q9Y5P2 127 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 NAV3Q8IVL0 2385 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 NPIPB9F8W1W9 429 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 KLF7O75840 302 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-218ENST00000545889 BTCP35070 178 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 RRN3P1Q2M238 152 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 C11orf87Q6NUJ2 197 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 FAM57AQ8TBR7 257 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 TMPRSS13Q9BYE2 586 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 IGHV3OR16-12A0A075B7B8 117 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 IGHV1-69-2A0A0G2JMI3 117 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 NPSP0C0P6 89 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 TNFSF10P50591 281 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 PAX5Q02548 391 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 SRSF6Q13247 344 aaKnown RBP7.44□□□□□ -1.22
CLIP1-218ENST00000545889 ANKRD39Q53RE8 183 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 C11orf42Q8N5U0 333 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 TIMP4Q99727 224 aa7.44□□□□□ -1.22
CLIP1-218ENST00000545889 MED19A0JLT2 244 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-218ENST00000545889 SHISA3A0PJX4 238 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 MGST3O14880 152 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 CYB5R3P00387 301 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-218ENST00000545889 LIMS3P0CW19 117 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 LIMS4P0CW20 117 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 SP6Q3SY56 376 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 PLAC9Q5JTB6 97 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 RNFT1Q5M7Z0 435 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 BMPERQ8N8U9 685 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 CTDSP1Q9GZU7 261 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 WDR13Q9H1Z4 485 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 E5RGE8 158 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 J3QKU1 62 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 CA11O75493 328 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 CST7O76096 145 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 ZFPL1O95159 310 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 MST1P26927 711 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 GABRA6Q16445 453 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 RNASE6Q93091 150 aaKnown RBP7.43□□□□□ -1.22
CLIP1-218ENST00000545889 NSG2Q9Y328 171 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 IGLV3-12A0A075B6K2 115 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 IGHV3-72A0A0B4J1Y9 119 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 TMEM8BA6NDV4 472 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 GEMIN2O14893 280 aaKnown RBP7.43□□□□□ -1.22
CLIP1-218ENST00000545889 DLEU1O43261 78 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 CLEC12BQ2HXU8 276 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 CXorf66Q5JRM2 361 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-218ENST00000545889 PEAR1Q5VY43 1037 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-218ENST00000545889 UNQ5815/PRO19632Q6UWF5 114 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 TMEM182Q6ZP80 229 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-218ENST00000545889 DDB2Q92466 427 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 ZMIZ1Q9ULJ6 1067 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 EREGO14944 169 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 NDUFB6O95139 128 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 FAM106AQ4KMX7 169 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 EBLN2Q6P2I7 272 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 RPS4Y2Q8TD47 263 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 ABHD14AQ9BUJ0 271 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 AK3Q9UIJ7 227 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 GAB2Q9UQC2 676 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 PIEZO2Q9H5I5 2752 aa7.43□□□□□ -1.22
CLIP1-218ENST00000545889 GSTZ1O43708 216 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 LIPFP07098 398 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 HIST1H1DP16402 221 aaKnown RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 ADCYAP1P18509 176 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 FAM3AP98173 230 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 AESQ08117 197 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 KHDC3LQ587J8 217 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 FAM27BQ5VT28 67 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 OR4C16Q8NGL9 310 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 BLNKQ8WV28 456 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 PHYHIPLQ96FC7 376 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 NOL4LQ96MY1 436 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 RCC2Q9P258 522 aaKnown RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 EXOGQ9Y2C4 368 aaKnown RBP7.42□□□□□ -1.22
CLIP1-218ENST00000545889 TRAV39A0A0B4J263 110 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 K7N7A8 449 aa7.42□□□□□ -1.22
CLIP1-218ENST00000545889 JTBO76095 146 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms