RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CD79AP11912 226 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF43P17038 809 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 TUBG1P23258 451 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 IDH2P48735 452 aaKnown RBP1.87□□□□□ -2.11
SNHG1-224ENST00000545688 CX3CR1P49238 355 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 CCT3P49368 545 aaKnown RBP1.87□□□□□ -2.11
SNHG1-224ENST00000545688 C2orf54Q08AI8 447 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 HIST3H3Q16695 136 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 TTMPQ5BVD1 217 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 XKR7Q5GH72 579 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 CLEC12AQ5QGZ9 265 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF678Q5SXM1 525 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 FAM201AQ5SY85 155 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 C1orf140Q5VVS0 124 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 PYHIN1Q6K0P9 492 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 NOXRED1Q6NXP6 359 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 DUX4L9Q6RFH8 374 aaPredicted RBP1.87□□□□□ -2.11
SNHG1-224ENST00000545688 SLC22A24Q8N4F4 322 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 MREGQ8N565 214 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 OR8B3Q8NGG8 313 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 OR5D16Q8NGK9 328 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 OR4C13Q8NGP0 309 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF563Q8TA94 476 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 SLC25A40Q8TBP6 338 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 SFXN5Q8TD22 340 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 DCAKDQ8WVC6 231 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 OR5P2Q8WZ92 322 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 CCDC126Q96EE4 140 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 OR8B2Q96RD0 313 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 CCT7Q99832 543 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 EBPLQ9BY08 206 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 OR2J1Q9GZK6 312 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 TUBG2Q9NRH3 451 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 EXD2Q9NVH0 621 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 TMEM38BQ9NVV0 291 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 SLC17A7Q9P2U7 560 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 KAAG1Q9UBP8 84 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 CLN8Q9UBY8 286 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 ZMAT5Q9UDW3 170 aaKnown RBP1.87□□□□□ -2.11
SNHG1-224ENST00000545688 POLR3HQ9Y535 204 aaPredicted RBP1.87□□□□□ -2.11
SNHG1-224ENST00000545688 DMBT1Q9UGM3 2413 aaPredicted RBP1.87□□□□□ -2.11
SNHG1-224ENST00000545688 A0A096LPI6 279 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 IGKV1D-13A0A0B4J2D9 117 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 CCDC182A6NF36 153 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 H3BUX3 64 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 NPFFO15130 113 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 EIF3HO15372 352 aaKnown RBP eCLIP1.86□□□□□ -2.11
SNHG1-224ENST00000545688 ATP5LO75964 103 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 CYB5R3P00387 301 aaPredicted RBP1.86□□□□□ -2.11
SNHG1-224ENST00000545688 PTHP01270 115 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 IGF2P01344 180 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 C1QCP02747 245 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 GAPDHP04406 335 aaKnown RBP1.86□□□□□ -2.11
SNHG1-224ENST00000545688 IFNW1P05000 195 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 P0C880 135 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 OR12D1P0DN82 309 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 IGKV1-13P0DP09 117 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 UBE2E1P51965 193 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 PPP1CBP62140 327 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 ARF6P62330 175 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 BLCAPP62952 87 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 ERVK-25P63136 954 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 HBA1P69905 142 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 PSG4Q00888 419 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 GLO1Q04760 184 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 BNIP2Q12982 314 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 MAB21L1Q13394 359 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 TBC1D28Q2M2D7 210 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 C3orf62Q6ZUJ4 267 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 VMO1Q7Z5L0 202 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 NATD1Q8N6N6 113 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 OR52H1Q8NGJ2 320 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 OR4D5Q8NGN0 318 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 SLC7A13Q8TCU3 470 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 C17orf50Q8WW18 174 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 CDKL2Q92772 493 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 PPCDCQ96CD2 204 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 TEX37Q96LM6 180 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 OR2V2Q96R30 315 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 SH3GL3Q99963 347 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 MRPL57Q9BQC6 102 aaKnown RBP1.86□□□□□ -2.11
SNHG1-224ENST00000545688 SULT4A1Q9BR01 284 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 EMC6Q9BV81 110 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 CHID1Q9BWS9 393 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 TAPBPLQ9BX59 468 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 SLC19A3Q9BZV2 496 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 IQCGQ9H095 443 aaKnown RBP1.86□□□□□ -2.11
SNHG1-224ENST00000545688 SLC38A1Q9H2H9 487 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 RAB18Q9NP72 206 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 PALMDQ9NP74 551 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 C1orf109Q9NX04 203 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 GLTPQ9NZD2 209 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 POFUT2Q9Y2G5 429 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 CAB39Q9Y376 341 aaPredicted RBP1.86□□□□□ -2.11
SNHG1-224ENST00000545688 TIMM22Q9Y584 194 aa1.86□□□□□ -2.11
SNHG1-224ENST00000545688 TSSC4Q9Y5U2 329 aaPredicted RBP1.86□□□□□ -2.11
SNHG1-224ENST00000545688 A0A087WUJ7 227 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 IGHV3-74A0A0B4J1X5 117 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 IGKV1D-43A0A0B4J1Z2 117 aa1.85□□□□□ -2.11
SNHG1-224ENST00000545688 BTBD17A6NE02 478 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms