RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TSEN15Q8WW01 171 aaKnown RBP11.11□□□□□ -0.63
RTN3-214ENST00000545432 OR14A2Q96R54 314 aa11.11□□□□□ -0.63
RTN3-214ENST00000545432 NEURL2Q9BR09 285 aa11.11□□□□□ -0.63
RTN3-214ENST00000545432 PLEKHA3Q9HB20 300 aa11.11□□□□□ -0.63
RTN3-214ENST00000545432 LRRC42Q9Y546 428 aa11.11□□□□□ -0.63
RTN3-214ENST00000545432 C13orf42A0A1B0GVH6 325 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 OR2A4O95047 310 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 CNIH1O95406 144 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 BDKRB2P30411 391 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 SSBP2P81877 361 aaPredicted RBP11.1□□□□□ -0.63
RTN3-214ENST00000545432 PSG5Q15238 335 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 TATDN3Q17R31 274 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 SLC22A6Q4U2R8 563 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 C6orf141Q5SZD1 244 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 DDI2Q5TDH0 399 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 DMKNQ6E0U4 476 aaPredicted RBP11.1□□□□□ -0.63
RTN3-214ENST00000545432 SIGIRRQ6IA17 410 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 MRPL30Q8TCC3 161 aaKnown RBP11.1□□□□□ -0.63
RTN3-214ENST00000545432 GPR148Q8TDV2 347 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 GHSRQ92847 366 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 TMEM68Q96MH6 324 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 S100A13Q99584 98 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 AGMATQ9BSE5 352 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 ERVK13-1Q9NX77 482 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 PIPOXQ9P0Z9 390 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 PEF1Q9UBV8 284 aaKnown RBP11.1□□□□□ -0.63
RTN3-214ENST00000545432 PEX16Q9Y5Y5 336 aa11.1□□□□□ -0.63
RTN3-214ENST00000545432 VPS13DQ5THJ4 4388 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 RAB29O14966 203 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 AIREO43918 545 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 PROP1O75360 226 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 TPPPO94811 219 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 CD2P06729 351 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 CD7P09564 240 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 GABRB1P18505 474 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 FUT3P21217 361 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 AADACP22760 399 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 FASP25445 335 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 SOX2P48431 317 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 GBX2P52951 348 aaPredicted RBP11.09□□□□□ -0.63
RTN3-214ENST00000545432 CD81P60033 236 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 GNGT1P63211 74 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 RPP25LQ8N5L8 163 aaKnown RBP11.09□□□□□ -0.63
RTN3-214ENST00000545432 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 GALMQ96C23 342 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 CYYR1Q96J86 154 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 OVOL2Q9BRP0 275 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 ZC4H2Q9NQZ6 224 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 MRPS18AQ9NVS2 196 aaKnown RBP11.09□□□□□ -0.63
RTN3-214ENST00000545432 KCNIP1Q9NZI2 227 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 SLC23A1Q9UHI7 598 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 ADAM30Q9UKF2 790 aa11.09□□□□□ -0.63
RTN3-214ENST00000545432 ANKRD34BA5PLL1 514 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 NUPR2A6NF83 97 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 SLC22A1O15245 554 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 ATP8B1O43520 1251 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 SPDEFO95238 335 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 CA2P00918 260 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 TRBV12-3P01733 135 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 MAS1P04201 325 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 ATF4P18848 351 aaPredicted RBP11.08□□□□□ -0.64
RTN3-214ENST00000545432 FSTP19883 344 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 GTF2A1P52655 376 aaPredicted RBP11.08□□□□□ -0.64
RTN3-214ENST00000545432 DYRK1AQ13627 763 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 PLGLAQ15195 96 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 HMGN3Q15651 99 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 CCDC58Q4VC31 144 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 CEMP1Q6PRD7 247 aaPredicted RBP11.08□□□□□ -0.64
RTN3-214ENST00000545432 AMIGO2Q86SJ2 522 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 WFDC3Q8IUB2 231 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 OR2AK2Q8NG84 335 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 ABHD5Q8WTS1 349 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 SLC7A6OSQ96CW6 309 aaPredicted RBP11.08□□□□□ -0.64
RTN3-214ENST00000545432 USMG5Q96IX5 58 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 Q96M66 194 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 TINAGL1Q9GZM7 467 aaPredicted RBP11.08□□□□□ -0.64
RTN3-214ENST00000545432 SLC2A8Q9NY64 477 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 METTL1Q9UBP6 276 aaKnown RBP11.08□□□□□ -0.64
RTN3-214ENST00000545432 WASHC3Q9Y3C0 194 aa11.08□□□□□ -0.64
RTN3-214ENST00000545432 SNTNA6NMZ2 147 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 PPP3R1P63098 170 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 FXYD3Q14802 87 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 CD300EQ496F6 205 aaPredicted RBP11.07□□□□□ -0.64
RTN3-214ENST00000545432 DNAL1Q4LDG9 190 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 RPL39P5Q59GN2 51 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 RPL22L1Q6P5R6 122 aaKnown RBP11.07□□□□□ -0.64
RTN3-214ENST00000545432 CDH26Q8IXH8 852 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 GATAD1Q8WUU5 269 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 CLCC1Q96S66 551 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 ZNF184Q99676 751 aaPredicted RBP11.07□□□□□ -0.64
RTN3-214ENST00000545432 SRD5A3Q9H8P0 318 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 IMPAD1Q9NX62 359 aa11.07□□□□□ -0.64
RTN3-214ENST00000545432 DNAH6Q9C0G6 4158 aa11.06□□□□□ -0.64
RTN3-214ENST00000545432 TRBV5-5A0A0J9YX44 114 aa11.06□□□□□ -0.64
RTN3-214ENST00000545432 OR11H12B2RN74 326 aa11.06□□□□□ -0.64
RTN3-214ENST00000545432 CRYGBP07316 175 aa11.06□□□□□ -0.64
RTN3-214ENST00000545432 GSTP1P09211 210 aaKnown RBP11.06□□□□□ -0.64
RTN3-214ENST00000545432 RIPK1Q13546 671 aa11.06□□□□□ -0.64
RTN3-214ENST00000545432 DEFB114Q30KQ6 69 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms