RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	ZNF121	P58317	390 aa	Predicted RBP	4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ACTA2	P62736	377 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ACTG2	P63267	376 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ACTC1	P68032	377 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ACTA1	P68133	377 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR52W1	Q6IF63	320 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	PYHIN1	Q6K0P9	492 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ATRAID	Q6UW56	229 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	C10orf99	Q6UWK7	81 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	GDPD3	Q7L5L3	318 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR2W3	Q7Z3T1	314 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ARPIN	Q7Z6K5	226 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	SMIM29	Q86T20	159 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	CATSPERD	Q86XM0	798 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	SBSPON	Q8IVN8	264 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZNF695	Q8IW36	515 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR52L1	Q8NGH7	329 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR52J3	Q8NH60	311 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZNF596	Q8TC21	504 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	FANK1	Q8TC84	345 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	GNPDA2	Q8TDQ7	276 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	RNF133	Q8WVZ7	376 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	EMG1	Q92979	244 aa	Known RBP	4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZNF714	Q96N38	554 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	HOPX	Q9BPY8	73 aa	Predicted RBP	4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	OVOL2	Q9BRP0	275 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	GON7	Q9BXV9	100 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	NIPAL2	Q9H841	368 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZNF556	Q9HAH1	456 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	DCAF13	Q9NV06	445 aa	Known RBP	4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	MBD2	Q9UBB5	411 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	HHLA2	Q9UM44	414 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	COMMD3-BMI1	R4GMX3	469 aa		4.69	□□□□□ -1.66
CPSF7-222	ENST00000544585	SORL1	Q92673	2214 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	IGHV2-26	A0A0B4J1V2	119 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	ACOD1	A6NK06	481 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	GADD45G	O95257	159 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	H2BFM	P0C1H6	154 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	ANXA3	P12429	323 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	CEACAM3	P40198	252 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	OPRL1	P41146	370 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR3A4P	P47883	348 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	ATP5I	P56385	69 aa	Predicted RBP	4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	BDH1	Q02338	343 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	LIPE	Q05469	1076 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	RIPPLY1	Q0D2K3	151 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	TSPAN31	Q12999	210 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	KIAA0141	Q14154	515 aa	Predicted RBP	4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	KIR2DS1	Q14954	304 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	HAGHL	Q6PII5	290 aa	Predicted RBP	4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZNF329	Q86UD4	541 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	ABHD12	Q8N2K0	398 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	LINC00471	Q8N535	108 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZNF676	Q8N7Q3	588 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	KLHL30-AS1	Q8NEE0	82 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR51L1	Q8NGJ5	315 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR10G7	Q8NGN6	311 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR8U1	Q8NH10	309 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	FAM81A	Q8TBF8	368 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	C7orf34	Q96L11	122 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	OR8B4	Q96RC9	309 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	TMEM133	Q9H2Q1	129 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	MED20	Q9H944	212 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	CMTM6	Q9NX76	183 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	IL20	Q9NYY1	176 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	GLS2	Q9UI32	602 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	BAIAP2	Q9UQB8	552 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	SLC22A13	Q9Y226	551 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	GSTK1	Q9Y2Q3	226 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	POLDIP2	Q9Y2S7	368 aa		4.68	□□□□□ -1.66
CPSF7-222	ENST00000544585	DNAH3	Q8TD57	4116 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585		A0A0G2JND7	137 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	METTL21EP	A6NDL7	271 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	ARRDC5	A6NEK1	342 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	SERPINE3	A8MV23	424 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	OOSP1	A8MZH6	123 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	SEC14L6	B5MCN3	397 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585		K7EQD1	137 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	TOR1A	O14656	332 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	DCTN3	O75935	186 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	ATP6V1G2	O95670	118 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	NRAS	P01111	189 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	IFNG	P01579	166 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	PIP	P12273	146 aa	Predicted RBP	4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	PRKACG	P22612	351 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	CD24	P25063	80 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	HAAO	P46952	286 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	GSS	P48637	474 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	PRRX1	P54821	245 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	EDDM3B	P56851	147 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	RAB25	P57735	213 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	ACTR3	P61158	418 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	CYCS	P99999	105 aa	Known RBP	4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	FGL1	Q08830	312 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	SAMD4B	Q5PRF9	694 aa	Known RBP	4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZNF684	Q5T5D7	378 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	FAM27D1	Q5T7N8	215 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	ZFAND6	Q6FIF0	208 aa		4.67	□□□□□ -1.66
CPSF7-222	ENST00000544585	GLYAT	Q6IB77	296 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms