RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 LOXL3P58215 753 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 FXYD4P59646 89 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 LCN2P80188 198 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 KIAA2026Q5HYC2 2103 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 PRAMEF5Q5TYX0 476 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 AADACL3Q5VUY0 350 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 METTL11BQ5VVY1 283 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 LINC01356Q8N9X3 169 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.8□□□□□ -1.16
YBX3-215ENST00000544504 OR13D1Q8NGV5 346 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 OR9G1Q8NH87 305 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 MARCH1Q8TCQ1 289 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 SECTM1Q8WVN6 248 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 TOMM40LQ969M1 308 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 C1orf159Q96HA4 380 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 UNKLQ9H9P5 680 aaKnown RBP7.8□□□□□ -1.16
YBX3-215ENST00000544504 GPR132Q9UNW8 380 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 TENM1Q9UKZ4 2725 aa7.8□□□□□ -1.16
YBX3-215ENST00000544504 ABCA1O95477 2261 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 IGHV3-43A0A0B4J1X8 118 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 GPR31O00270 319 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 TOR1AO14656 332 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 ARPC1BO15143 372 aaKnown RBP7.79□□□□□ -1.16
YBX3-215ENST00000544504 IL5P05113 134 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 OR8U9P0C7N5 309 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 IGHV3-43DP0DP04 118 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 OMGP23515 440 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 ZFP36P26651 326 aaKnown RBP7.79□□□□□ -1.16
YBX3-215ENST00000544504 PPP1CCP36873 323 aaKnown RBP7.79□□□□□ -1.16
YBX3-215ENST00000544504 MECP2P51608 486 aaKnown RBP7.79□□□□□ -1.16
YBX3-215ENST00000544504 DVL1P1P54792 670 aaPredicted RBP7.79□□□□□ -1.16
YBX3-215ENST00000544504 RND3P61587 244 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 PAX2Q02962 417 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 LTC4SQ16873 150 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 TMEM128Q5BJH2 165 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 KCTD9Q7L273 389 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 ZNF645Q8N7E2 425 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 OR8U1Q8NH10 309 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 UBALD1Q8TB05 177 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 ZNF596Q8TC21 504 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 DACT3Q96B18 629 aaPredicted RBP7.79□□□□□ -1.16
YBX3-215ENST00000544504 ABHD14AQ9BUJ0 271 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 RSRP1Q9BUV0 290 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 CLEC7AQ9BXN2 247 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 TMPRSS13Q9BYE2 586 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 FXYD6Q9H0Q3 95 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 TMEM133Q9H2Q1 129 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 PIPOXQ9P0Z9 390 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 KCNS2Q9ULS6 477 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 GAB2Q9UQC2 676 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 KCNIP3Q9Y2W7 256 aa7.79□□□□□ -1.16
YBX3-215ENST00000544504 AMMECR1Q9Y4X0 333 aaPredicted RBP7.79□□□□□ -1.16
YBX3-215ENST00000544504 TRAV6A0A075B6T7 132 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 A0A096LNT2 108 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 MEX3AA1L020 520 aaKnown RBP7.78□□□□□ -1.16
YBX3-215ENST00000544504 FAM157AC9JC47 383 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 J3QLI3 93 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 RAB29O14966 203 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 ANXA3P12429 323 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 SRD5A1P18405 259 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 GPR12P47775 334 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 ARF6P62330 175 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 SRSF2Q01130 221 aaKnown RBP7.78□□□□□ -1.16
YBX3-215ENST00000544504 GNMTQ14749 295 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 DCAF12L2Q5VW00 463 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 FAM71F2Q6NXP2 309 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 Q6ZNX1 250 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 SLC25A48Q6ZT89 311 aaKnown RBP7.78□□□□□ -1.16
YBX3-215ENST00000544504 TMED4Q7Z7H5 227 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 SLC25A42Q86VD7 318 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 GLCCI1Q86VQ1 547 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 SGPP2Q8IWX5 399 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 ABHD12Q8N2K0 398 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 TEX29Q8N6K0 151 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 TCTEX1D1Q8N7M0 179 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 ZNF439Q8NDP4 499 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 BEND2Q8NDZ0 799 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 UPRTQ96BW1 309 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 ADTRPQ96IZ2 230 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 S1PR3Q99500 378 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 SUCNR1Q9BXA5 334 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 OR2D2Q9H210 308 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 MMP28Q9H239 520 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 PSG11Q9UQ72 335 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 VSIG4Q9Y279 399 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 INSIG2Q9Y5U4 225 aa7.78□□□□□ -1.16
YBX3-215ENST00000544504 IGHV2-26A0A0B4J1V2 119 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 TEX13DA0A0J9YY54 714 aaPredicted RBP7.77□□□□□ -1.17
YBX3-215ENST00000544504 SNRPGP15A8MWD9 76 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 J3QR06 171 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 TOX4O94842 621 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 SPNP16150 400 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 GNRHRP30968 328 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 CEACAM3P40198 252 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 PIGPP57054 158 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 SRPXP78539 464 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 BAMBIQ13145 260 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 CATR1Q13166 79 aa7.77□□□□□ -1.17
YBX3-215ENST00000544504 TMEM249Q2WGJ8 235 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms