RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ZNF506Q5JVG8 444 aa12.74□□□□□ -0.37
CHFR-223ENST00000544268 OR4X1Q8NH49 305 aa12.74□□□□□ -0.37
CHFR-223ENST00000544268 EXTL1Q92935 676 aa12.74□□□□□ -0.37
CHFR-223ENST00000544268 SYT3Q9BQG1 590 aa12.74□□□□□ -0.37
CHFR-223ENST00000544268 C12orf49Q9H741 205 aa12.74□□□□□ -0.37
CHFR-223ENST00000544268 DKK4Q9UBT3 224 aa12.74□□□□□ -0.37
CHFR-223ENST00000544268 VAX2Q9UIW0 290 aa12.74□□□□□ -0.37
CHFR-223ENST00000544268 ZNF816-ZNF321PA0A0X1KG74 233 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 PHF1O43189 567 aaPredicted RBP12.73□□□□□ -0.37
CHFR-223ENST00000544268 CA11O75493 328 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 FUT6P51993 359 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 PAX5Q02548 391 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 TBR1Q16650 682 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 RNASE8Q8TDE3 154 aaKnown RBP12.73□□□□□ -0.37
CHFR-223ENST00000544268 TRIB1Q96RU8 372 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 CLCF1Q9UBD9 225 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 SLC7A11Q9UPY5 501 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 PDCD6O75340 191 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 RPLP1P05386 114 aaKnown RBP12.73□□□□□ -0.37
CHFR-223ENST00000544268 SCTP09683 121 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 FUT3P21217 361 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 GTF3C1Q12789 2109 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 P4HA3Q7Z4N8 544 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 MRPL52Q86TS9 123 aaKnown RBP12.73□□□□□ -0.37
CHFR-223ENST00000544268 ZNF100Q8IYN0 542 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 SARAFQ96BY9 339 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 MSI2Q96DH6 328 aaKnown RBP12.73□□□□□ -0.37
CHFR-223ENST00000544268 C1QTNF5Q9BXJ0 243 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 CBLN4Q9NTU7 201 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 RAXQ9Y2V3 346 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 NCOR2Q9Y618 2525 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 ZZEF1O43149 2961 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 ESPL1Q14674 2120 aa12.73□□□□□ -0.37
CHFR-223ENST00000544268 A0A1W2PPQ1 181 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 BMI1P35226 326 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 PRDX4Q13162 271 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 IQCJQ1A5X6 159 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 SP5Q6BEB4 398 aaPredicted RBP12.72□□□□□ -0.37
CHFR-223ENST00000544268 GSX1Q9H4S2 264 aaPredicted RBP12.72□□□□□ -0.37
CHFR-223ENST00000544268 PRSS50Q9UI38 385 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 SYNGR1O43759 233 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 DTYMKP23919 212 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 WNT5AP41221 380 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 MALLQ13021 153 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 HERPUD1Q15011 391 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 GCNT2Q8N0V5 402 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 C17orf78Q8N4C9 275 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 MTCH1Q9NZJ7 389 aa12.72□□□□□ -0.37
CHFR-223ENST00000544268 IGKV1D-13A0A0B4J2D9 117 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 OPN1MWP04001 364 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 OR4A8P0C604 315 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 OPN1MW2P0DN77 364 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 OPN1MW3P0DN78 364 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 IGKV1-13P0DP09 117 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 PNRC1Q12796 327 aaPredicted RBP12.71□□□□□ -0.37
CHFR-223ENST00000544268 ARL6IP1Q15041 203 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 SPATA46Q5T0L3 261 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 C1orf194Q5T5A4 169 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 ZNF573Q86YE8 665 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 OR2G3Q8NGZ4 309 aa12.71□□□□□ -0.37
CHFR-223ENST00000544268 TRAV39A0A0B4J263 110 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 TNFSF12O43508 249 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.38
CHFR-223ENST00000544268 ECI1P42126 302 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 OR3A1P47881 315 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 PCBD1P61457 104 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 HOXA4Q00056 320 aaPredicted RBP12.71□□□□□ -0.38
CHFR-223ENST00000544268 IL13RA2Q14627 380 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 FBXW9Q5XUX1 488 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 GMPPAQ96IJ6 420 aaPredicted RBP12.71□□□□□ -0.38
CHFR-223ENST00000544268 C18orf12Q96KH6 178 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 CABLES2Q9BTV7 478 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 SRD5A3Q9H8P0 318 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 ZNF286AQ9HBT8 521 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 GP6Q9HCN6 339 aa12.71□□□□□ -0.38
CHFR-223ENST00000544268 RCL1Q9Y2P8 373 aaKnown RBP12.71□□□□□ -0.38
CHFR-223ENST00000544268 A0A1B0GU03 582 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 A0A1W2PR80 420 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 NDUFS8O00217 210 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 PPYP01298 95 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 GNRHRP30968 328 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 COL10A1Q03692 680 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 RTL6Q6ICC9 239 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 TEX38Q6PEX7 206 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 COLCA1Q6ZS62 124 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 MYPOPQ86VE0 399 aaPredicted RBP12.7□□□□□ -0.38
CHFR-223ENST00000544268 SPSB4Q96A44 273 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 MOB3AQ96BX8 217 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 ABHD14AQ9BUJ0 271 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 REPIN1Q9BWE0 567 aaKnown RBP12.7□□□□□ -0.38
CHFR-223ENST00000544268 SEPSECSQ9HD40 501 aaKnown RBP12.7□□□□□ -0.38
CHFR-223ENST00000544268 ZNF71Q9NQZ8 489 aaPredicted RBP12.7□□□□□ -0.38
CHFR-223ENST00000544268 RPH3ALQ9UNE2 315 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 CHD8Q9HCK8 2581 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 NKX2-6A6NCS4 301 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 ZNF732B4DXR9 585 aa12.7□□□□□ -0.38
CHFR-223ENST00000544268 SS18L1O75177 396 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms