RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CENPVL1A0A0U1RR11 272 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 K7N7A8 449 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 SRIP30626 198 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 OR4C13Q8NGP0 309 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 METTL1Q9UBP6 276 aaKnown RBP13.4□□□□□ -0.26
CHD4-210ENST00000544040 C1QCP02747 245 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 NPBWR2P48146 333 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 TMEM177Q53S58 311 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 COX14Q96I36 57 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 GAB4Q2WGN9 574 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 SLC25A34Q6PIV7 304 aa13.4□□□□□ -0.26
CHD4-210ENST00000544040 A0A1W2PP11 408 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 IFITM3Q01628 133 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 SLC25A53Q5H9E4 307 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 NUP205Q92621 2012 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 FAM181BA6NEQ2 426 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 HKR1P10072 659 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 MAP1LC3AQ9H492 121 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 FCGR2BP31994 310 aaPredicted RBP13.39□□□□□ -0.27
CHD4-210ENST00000544040 CXorf66Q5JRM2 361 aaPredicted RBP13.39□□□□□ -0.27
CHD4-210ENST00000544040 FOXC2Q99958 501 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 TTC3P53804 2025 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 NPIPB6E9PJ23 425 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 TMEM252Q8N6L7 170 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 ZNF418Q8TF45 676 aaPredicted RBP13.39□□□□□ -0.27
CHD4-210ENST00000544040 ZNF714Q96N38 554 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 REG1AP05451 166 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 C1QTNF12Q5T7M4 302 aa13.39□□□□□ -0.27
CHD4-210ENST00000544040 CACNA1CQ13936 2221 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 PPIAL4EA0A075B759 164 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 PPIAL4DF5H284 164 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 PPIAL4FP0DN26 164 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 ANOS1P23352 680 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 PMCHL1Q16048 86 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 LEMD1Q68G75 181 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 C1orf210Q8IVY1 113 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 OR2Y1Q8NGV0 311 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 PPIAL4AQ9Y536 164 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 PHLDA3Q9Y5J5 127 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 FAM74A4Q5TZK3 123 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 C9orf40Q8IXQ3 194 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 NUP37Q8NFH4 326 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 CX3CL1P78423 397 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 SERF2P84101 59 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 MBNL2Q5VZF2 373 aaKnown RBP13.38□□□□□ -0.27
CHD4-210ENST00000544040 OR52M1Q8NGK5 317 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 OR13C6PQ8NH95 151 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 SRSF12Q8WXF0 261 aaKnown RBP13.38□□□□□ -0.27
CHD4-210ENST00000544040 ZNF660Q6AZW8 331 aaPredicted RBP13.38□□□□□ -0.27
CHD4-210ENST00000544040 UPK3AO75631 287 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 ADRA2AP08913 450 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 NMBP08949 121 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 RPL27AP46776 148 aaKnown RBP13.38□□□□□ -0.27
CHD4-210ENST00000544040 SMAGPQ0VAQ4 97 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 ZNF273Q14593 569 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 BHLHA9Q7RTU4 235 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 ZCCHC14Q8WYQ9 949 aaKnown RBP13.38□□□□□ -0.27
CHD4-210ENST00000544040 SCNM1Q9BWG6 230 aa13.38□□□□□ -0.27
CHD4-210ENST00000544040 MBD1Q9UIS9 605 aaPredicted RBP13.38□□□□□ -0.27
CHD4-210ENST00000544040 DDX60LQ5H9U9 1706 aaKnown RBP13.37□□□□□ -0.27
CHD4-210ENST00000544040 SLC25A17O43808 307 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 PF4V1P10720 104 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 ZNF645Q8N7E2 425 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 FOLR2P14207 255 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 MEF2BQ02080 365 aaPredicted RBP13.37□□□□□ -0.27
CHD4-210ENST00000544040 BIVMQ86UB2 503 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 MRAP2Q96G30 205 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 MAST2Q6P0Q8 1798 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 LIFP15018 202 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 LHX8Q68G74 356 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 ZNF600Q6ZNG1 722 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 RGPD1P0DJD0 1748 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 A0A1W2PPC1 479 aa13.37□□□□□ -0.27
CHD4-210ENST00000544040 HSPB1P04792 205 aaKnown RBP13.36□□□□□ -0.27
CHD4-210ENST00000544040 LINC00469Q8N7U9 141 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 TMEM52Q8NDY8 209 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 TUBD1Q9UJT1 453 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 A0A0B4J293 547 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 MT-ND6P03923 174 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 OR2H2O95918 312 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 TGFAP01135 160 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 OR4D5Q8NGN0 318 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 ZDHHC8Q9ULC8 765 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 ASCC3Q8N3C0 2202 aaKnown RBP13.36□□□□□ -0.27
CHD4-210ENST00000544040 H0Y980 276 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 HOXC4P09017 264 aaPredicted RBP13.36□□□□□ -0.27
CHD4-210ENST00000544040 ARF6P62330 175 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 FBXW9Q5XUX1 488 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 ZNF826PQ6ZT77 177 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 LEAP2Q969E1 77 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 LINC00470Q9BZP3 86 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 OPN3Q9H1Y3 402 aaPredicted RBP13.36□□□□□ -0.27
CHD4-210ENST00000544040 WNT16Q9UBV4 365 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 CXorf51AA0A1B0GTR3 108 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 SNAI2O43623 268 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 CRYBB3P26998 211 aa13.36□□□□□ -0.27
CHD4-210ENST00000544040 IGKV1D-16P01601 117 aa13.35□□□□□ -0.27
CHD4-210ENST00000544040 HLA-DQA1P01909 254 aa13.35□□□□□ -0.27
CHD4-210ENST00000544040 TMEM45BQ96B21 275 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms