RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
PPME1-208ENST00000543525 TMEM41BQ5BJD5 291 aa11.36□□□□□ -0.59
PPME1-208ENST00000543525 SLC35E4Q6ICL7 350 aa11.36□□□□□ -0.59
PPME1-208ENST00000543525 FGFRL1Q8N441 504 aa11.36□□□□□ -0.59
PPME1-208ENST00000543525 PINX1Q96BK5 328 aaKnown RBP11.36□□□□□ -0.59
PPME1-208ENST00000543525 GALMQ96C23 342 aa11.36□□□□□ -0.59
PPME1-208ENST00000543525 HES4Q9HCC6 221 aa11.36□□□□□ -0.59
PPME1-208ENST00000543525 OBP2BQ9NPH6 170 aa11.36□□□□□ -0.59
PPME1-208ENST00000543525 CLCF1Q9UBD9 225 aa11.36□□□□□ -0.59
PPME1-208ENST00000543525 OOEPA6NGQ2 149 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 ZNF727A8MUV8 499 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 BCL2P10415 239 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 IL2RGP31785 369 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
PPME1-208ENST00000543525 SPANXN5Q5MJ07 72 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 HAPLN4Q86UW8 402 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 CXXC4Q9H2H0 198 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 SEBOXQ9HB31 216 aaPredicted RBP11.35□□□□□ -0.59
PPME1-208ENST00000543525 ZNF407Q9C0G0 2248 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 IFNA1P01562 189 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 ZNF806P0C7X5 589 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 NQO2P16083 231 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 HOXC12P31275 282 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 OR3A1P47881 315 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 GLIPR1P48060 266 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 TNFSF10P50591 281 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 SLC38A11Q08AI6 406 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 CATR1Q13166 79 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 LCN15Q6UWW0 184 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 Q6ZT83 130 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 FAM214BQ7L5A3 538 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 TMPRSS7Q7RTY8 843 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 OR1L1Q8NH94 360 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 KLF14Q8TD94 323 aaPredicted RBP11.35□□□□□ -0.59
PPME1-208ENST00000543525 TRIB1Q96RU8 372 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 WDR61Q9GZS3 305 aaKnown RBP11.35□□□□□ -0.59
PPME1-208ENST00000543525 RBKSQ9H477 322 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 TIMM9Q9Y5J7 89 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 PKD1L2Q7Z442 2459 aa11.35□□□□□ -0.59
PPME1-208ENST00000543525 IGHG3P01860 377 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 TUBG1P23258 451 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 MPV17P39210 176 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 CEBPDP49716 269 aaPredicted RBP11.34□□□□□ -0.59
PPME1-208ENST00000543525 CTAG1AP78358 180 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 PMP22Q01453 160 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 TNFRSF9Q07011 255 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 RBMS3Q6XE24 437 aaKnown RBP11.34□□□□□ -0.59
PPME1-208ENST00000543525 NANPQ8TBE9 248 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 NINJ1Q92982 152 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 OR4C12Q96R67 309 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 P2RX4Q99571 388 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 TOLLIPQ9H0E2 274 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 OR2D2Q9H210 308 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 TUBG2Q9NRH3 451 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 TINAGQ9UJW2 476 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 ESPL1Q14674 2120 aa11.34□□□□□ -0.59
PPME1-208ENST00000543525 DNAJC13O75165 2243 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 IGHV3-64DA0A0J9YX35 117 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 ZFP92A6NM28 416 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 C12orf77C9JDV5 145 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 PSPNO60542 156 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 CLDN1O95832 211 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 EIF2S3P41091 472 aaKnown RBP11.33□□□□□ -0.6
PPME1-208ENST00000543525 RAB11AP62491 216 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 PNRC1Q12796 327 aaPredicted RBP11.33□□□□□ -0.6
PPME1-208ENST00000543525 ATP6V1FQ16864 119 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 TMEM14EPQ6UXP3 125 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 MRGPRGQ86SM5 289 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 GCNT2Q8N0V5 402 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 TCTEX1D1Q8N7M0 179 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 PRR7Q8TB68 274 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 TAF15Q92804 592 aaKnown RBP eCLIP11.33□□□□□ -0.6
PPME1-208ENST00000543525 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
PPME1-208ENST00000543525 ZNF251Q9BRH9 671 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 VSIRQ9H7M9 311 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 HSPB7Q9UBY9 170 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 ZNF891A8MT65 544 aaPredicted RBP11.33□□□□□ -0.6
PPME1-208ENST00000543525 HBZP02008 142 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 CD82P27701 267 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 B2MP61769 119 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
PPME1-208ENST00000543525 ELOBQ15370 118 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 ZNF726P1Q15940 193 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 ZNF674Q2M3X9 581 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 SLC16A13Q7RTY0 426 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 OR52L2PQ8NGH6 319 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 ZNF665Q9H7R5 613 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.33□□□□□ -0.6
PPME1-208ENST00000543525 VAX2Q9UIW0 290 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 MED13Q9UHV7 2174 aa11.33□□□□□ -0.6
PPME1-208ENST00000543525 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
PPME1-208ENST00000543525 TM4SF5O14894 197 aa11.32□□□□□ -0.6
PPME1-208ENST00000543525 MLNRO43193 412 aa11.32□□□□□ -0.6
PPME1-208ENST00000543525 PMS2P11Q13670 270 aa11.32□□□□□ -0.6
PPME1-208ENST00000543525 FAM90A2PQ658T7 463 aa11.32□□□□□ -0.6
PPME1-208ENST00000543525 ACP7Q6ZNF0 438 aa11.32□□□□□ -0.6
PPME1-208ENST00000543525 C11orf53Q8IXP5 236 aa11.32□□□□□ -0.6
PPME1-208ENST00000543525 CNEP1R1Q8N9A8 125 aa11.32□□□□□ -0.6
PPME1-208ENST00000543525 C1orf162Q8NEQ5 155 aaPredicted RBP11.32□□□□□ -0.6
PPME1-208ENST00000543525 Q8WTZ3 238 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms