RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SOX6P35712 828 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 OR10A3P58181 314 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ACTBP60709 375 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 FAM71F2Q6NXP2 309 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MOB1BQ7L9L4 216 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 NPBQ8NG41 125 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 IL1F10Q8WWZ1 152 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 PTX4Q96A99 478 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RCC1LQ96I51 464 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 C11orf54Q9H0W9 315 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 Q9N2K0 584 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ABRACLQ9P1F3 81 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 OR1A1Q9P1Q5 309 aa10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ZNF107Q9UII5 783 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF1A-215ENST00000543359 IGHG4P01861 327 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 SCTP09683 121 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 PSMD7P51665 324 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 GABARAPL2P60520 117 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 HLA-DRB3P79483 266 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 FOXE3Q13461 319 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 KIAA0141Q14154 515 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MOGAT2Q3SYC2 334 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RPL39P5Q59GN2 51 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 HES5Q5TA89 166 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 UBE2UQ5VVX9 321 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 NR2C2APQ86WQ0 139 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ZNF695Q8IW36 515 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RAX2Q96IS3 184 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ABHD14BQ96IU4 210 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CHMP1AQ9HD42 196 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 PIPOXQ9P0Z9 390 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 STEAP1Q9UHE8 339 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RAB22AQ9UL26 194 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 BLOC1S6Q9UL45 172 aa10.26□□□□□ -0.77
TNFRSF1A-215ENST00000543359 IGHV7-81A0A0B4J1V7 117 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 IFITM5A6NNB3 132 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 DENRO43583 198 aaKnown RBP10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MRPS14O60783 128 aaKnown RBP10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 NDUFA3O95167 84 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 HLA-DRB1P01911 266 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ELANEP08246 267 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 SLC2A2P11168 524 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 PSMB8P28062 276 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 PPIFP30405 207 aaKnown RBP10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CEACAM6P40199 344 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MYCNOSP40205 109 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CDX1P47902 265 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MMDQ15546 238 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 C5orf64Q2M2E5 130 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 SPARTQ8N0X7 666 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 KLHL30-AS1Q8NEE0 82 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 OR56B1Q8NGI3 324 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 SETD6Q8TBK2 473 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 KCTD7Q96MP8 289 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 GON7Q9BXV9 100 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 TOLLIPQ9H0E2 274 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 C12orf4Q9NQ89 552 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MGAT4AQ9UM21 535 aa10.25□□□□□ -0.77
TNFRSF1A-215ENST00000543359 HUWE1Q7Z6Z7 4374 aaKnown RBP10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 A0A0B4J203 849 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 K7EIL1 84 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RAB27BO00194 218 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RAB29O14966 203 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 NBR2O15453 112 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 DUS4LO95620 317 aaKnown RBP10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 IGLV1-40P01703 118 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 SNRPBP14678 240 aaKnown RBP10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 GALP22466 123 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 ZBTB25P24278 435 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 LINC00205P59089 165 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 NDPQ00604 133 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 KIR2DS1Q14954 304 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 C19orf54Q5BKX5 351 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 OR5AN1Q8NGI8 311 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MRAPQ8TCY5 172 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 DUX3Q96PT4 197 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CMSS1Q9BQ75 279 aaKnown RBP10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CHCHD6Q9BRQ6 235 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 OR51J1Q9H342 316 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 GHITMQ9H3K2 345 aa10.24□□□□□ -0.77
TNFRSF1A-215ENST00000543359 TRDCB7Z8K6 153 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 G3V318 75 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 H0YJW9 148 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CCL24O00175 119 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 PDCD5O14737 125 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RRP9O43818 475 aaKnown RBP10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 DEFB136Q30KP8 78 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 CXorf66Q5JRM2 361 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 FAM131AQ6UXB0 335 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 GLDNQ6ZMI3 551 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 KLK15Q9H2R5 256 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 RNF150Q9ULK6 438 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 WSB1Q9Y6I7 421 aa10.23□□□□□ -0.77
TNFRSF1A-215ENST00000543359 WI2-2373I1.2A0A1W2PRP0 233 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 OR5H14A6NHG9 310 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 NUDT19A8MXV4 375 aa10.22□□□□□ -0.77
TNFRSF1A-215ENST00000543359 MFNGO00587 321 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms