RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PRRX1P54821 245 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 DLX1P56177 255 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 PIGPP57054 158 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 UBE2MP61081 183 aaKnown RBP8.72□□□□□ -1.01
DDB1-221ENST00000543162 MSMO1Q15800 293 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 TATDN3Q17R31 274 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 C4orf46Q504U0 113 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 TMEM128Q5BJH2 165 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 DCAF12L2Q5VW00 463 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 FAHD2BQ6P2I3 314 aaPredicted RBP8.72□□□□□ -1.01
DDB1-221ENST00000543162 VMO1Q7Z5L0 202 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 LYG1Q8N1E2 194 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 PNKDQ8N490 385 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 DRAM1Q8N682 238 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 BVESQ8NE79 360 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 OR13D1Q8NGV5 346 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 CAPSLQ8WWF8 208 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 FAHD2AQ96GK7 314 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 AKR1E2Q96JD6 320 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 AGMATQ9BSE5 352 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 PCGF1Q9BSM1 259 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 IFI27L2Q9H2X8 130 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 GPN1Q9HCN4 374 aaPredicted RBP8.72□□□□□ -1.01
DDB1-221ENST00000543162 SLC2A9Q9NRM0 540 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 PDZD2O15018 2839 aa8.72□□□□□ -1.01
DDB1-221ENST00000543162 hCG_2014768A0A024R1R8 64 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 VGLL3A8MV65 326 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 RAB29O14966 203 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 IGLV2-14P01704 120 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 IL5P05113 134 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 OR4E1P0C645 316 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 VAMP1P23763 118 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 GATA3P23771 443 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 GZMKP49863 264 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 RND3P61587 244 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 PRB3Q04118 309 aaPredicted RBP8.71□□□□□ -1.02
DDB1-221ENST00000543162 PAX8Q06710 450 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 PPP1R1AQ13522 171 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 TMEM249Q2WGJ8 235 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 NCR3LG1Q68D85 454 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 C11orf88Q6PI97 169 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 GLDNQ6ZMI3 551 aaPredicted RBP8.71□□□□□ -1.02
DDB1-221ENST00000543162 SGPP2Q8IWX5 399 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 LINC00311Q8N616 119 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.71□□□□□ -1.02
DDB1-221ENST00000543162 ZBTB34Q8NCN2 500 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 OR10X1Q8NGY0 326 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 ZNF596Q8TC21 504 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 RTN4IP1Q8WWV3 396 aaPredicted RBP8.71□□□□□ -1.02
DDB1-221ENST00000543162 TNFRSF14Q92956 283 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 TMEM230Q96A57 120 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 TMEM186Q96B77 213 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 MSI2Q96DH6 328 aaKnown RBP8.71□□□□□ -1.02
DDB1-221ENST00000543162 SEC22CQ9BRL7 303 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 GHITMQ9H3K2 345 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 UNKLQ9H9P5 680 aaKnown RBP8.71□□□□□ -1.02
DDB1-221ENST00000543162 HIF1ANQ9NWT6 349 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 PIPOXQ9P0Z9 390 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 ZNRD1Q9P1U0 126 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 ITGB1BP2Q9UKP3 347 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 ALG5Q9Y673 324 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 CREBBPQ92793 2442 aa8.71□□□□□ -1.02
DDB1-221ENST00000543162 MAP1AP78559 2803 aaPredicted RBP8.7□□□□□ -1.02
DDB1-221ENST00000543162 CR1P17927 2039 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 SAA2-SAA4A0A096LPE2 208 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 A0A0B4J293 547 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 A0A1B0GVG6 124 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 CRYM-AS1A6NIL9 109 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 RNF212BA8MTL3 300 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 MPPED1O15442 326 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 TNFSF12O43508 249 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 PGLYRP1O75594 196 aaPredicted RBP8.7□□□□□ -1.02
DDB1-221ENST00000543162 TGFAP01135 160 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 HLA-AP01891 365 aaKnown RBP8.7□□□□□ -1.02
DDB1-221ENST00000543162 SAA2P0DJI9 122 aaPredicted RBP8.7□□□□□ -1.02
DDB1-221ENST00000543162 IGHV4-31P0DP07 118 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 MMP9P14780 707 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 IL3RAP26951 378 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 DHODHQ02127 395 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 CBX3Q13185 183 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 KLRD1Q13241 179 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 DHRS2Q13268 280 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 LYG2Q86SG7 212 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 TBC1D26Q86UD7 250 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 BEND2Q8NDZ0 799 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 OR11H6Q8NGC7 330 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 TBX15Q96SF7 602 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 GPHA2Q96T91 129 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 S1PR3Q99500 378 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 NAA60Q9H7X0 242 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 SDHAF2Q9NX18 166 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 GAB2Q9UQC2 676 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 KCNIP3Q9Y2W7 256 aa8.7□□□□□ -1.02
DDB1-221ENST00000543162 AMMECR1Q9Y4X0 333 aaPredicted RBP8.7□□□□□ -1.02
DDB1-221ENST00000543162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.7□□□□□ -1.026e-9■■■■□ 25.5
DDB1-221ENST00000543162 A0A0A6YYJ9 748 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 C9orf170A2RU37 121 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 C7orf66A4D0T2 115 aa8.69□□□□□ -1.02
DDB1-221ENST00000543162 SNRPGP15A8MWD9 76 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 897.8 ms