RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 PLGRKTQ9HBL7 147 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 SLC23A1Q9UHI7 598 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 DNAH9Q9NYC9 4486 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 TMEM14DPA8MWL7 114 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 ITGB1BP1O14713 200 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 HSPA12AO43301 675 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 RBBP9O75884 186 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 NDUFA3O95167 84 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 ARSBP15848 533 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 PPIFP30405 207 aaKnown RBP10.24□□□□□ -0.77
RTN3-212ENST00000543123 ZNF616Q08AN1 781 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 UNC119Q13432 240 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 ZNF880Q6PDB4 577 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 FAM131AQ6UXB0 335 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 OR11H1Q8NG94 326 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 C12orf4Q9NQ89 552 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 RNF150Q9ULK6 438 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 LSM2Q9Y333 95 aaKnown RBP10.24□□□□□ -0.77
RTN3-212ENST00000543123 TPRKBQ9Y3C4 175 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 WSB1Q9Y6I7 421 aa10.24□□□□□ -0.77
RTN3-212ENST00000543123 TRBV6-6A0A0A6YYG2 114 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 IGHV7-81A0A0B4J1V7 117 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 H7C2Y5 167 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 ST8SIA5O15466 376 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 GSTP1P09211 210 aaKnown RBP10.23□□□□□ -0.77
RTN3-212ENST00000543123 ZBTB25P24278 435 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 ECI1P42126 302 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 TMEM267Q0VDI3 215 aaPredicted RBP10.23□□□□□ -0.77
RTN3-212ENST00000543123 ZNF260Q3ZCT1 412 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 LIPKQ5VXJ0 399 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 ZNF660Q6AZW8 331 aaPredicted RBP10.23□□□□□ -0.77
RTN3-212ENST00000543123 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 ZNF491Q8N8L2 437 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 OR1N2Q8NGR9 330 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 NICN1Q9BSH3 213 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 HSF4Q9ULV5 492 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 FOXA2Q9Y261 457 aaPredicted RBP10.23□□□□□ -0.77
RTN3-212ENST00000543123 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
RTN3-212ENST00000543123 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 KMT2CQ8NEZ4 4911 aaKnown RBP10.22□□□□□ -0.77
RTN3-212ENST00000543123 G3V318 75 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 I3L521 148 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 SLC17A2O00624 439 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 RRHO14718 337 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 CD37P11049 281 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 CNTFRP26992 372 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 CD40LGP29965 261 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 RAB9AP51151 201 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 PSMD7P51665 324 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 HLA-DRB3P79483 266 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 MRPS15P82914 257 aaKnown RBP10.22□□□□□ -0.77
RTN3-212ENST00000543123 QRFPP83859 136 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 RAB11BQ15907 218 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 ECSCRQ19T08 205 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 MINDY2Q8NBR6 621 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 ABHD5Q8WTS1 349 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 TMEM203Q969S6 136 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 RNF5Q99942 180 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 LPAR5Q9H1C0 372 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 ISYNA1Q9NPH2 558 aa10.22□□□□□ -0.77
RTN3-212ENST00000543123 ZNF256Q9Y2P7 627 aaPredicted RBP10.22□□□□□ -0.77
RTN3-212ENST00000543123 H0YJW9 148 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 RGS10O43665 173 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 SPDEFO95238 335 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 HSMCR30P0CW71 290 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 CEACAM6P40199 344 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 CRIP2P52943 208 aaPredicted RBP10.21□□□□□ -0.77
RTN3-212ENST00000543123 TPBGQ13641 420 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 IRF3Q14653 427 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 P2RY14Q15391 338 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 RPL39P5Q59GN2 51 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 ZNF429Q86V71 674 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 FAM89BQ8N5H3 189 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 OR56B1Q8NGI3 324 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 RITA1Q96K30 269 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 PRR25Q96S07 402 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 TSNAXQ99598 290 aaKnown RBP10.21□□□□□ -0.77
RTN3-212ENST00000543123 KLK15Q9H2R5 256 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 KCNK15Q9H427 330 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 GNB4Q9HAV0 340 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 AK3Q9UIJ7 227 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 ZNF221Q9UK13 617 aa10.21□□□□□ -0.77
RTN3-212ENST00000543123 A0A1W2PN81 502 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 SOCS1O15524 211 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 LY86O95711 162 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 APOA2P02652 100 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 CT45A6P0DMU7 189 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 CT45A5P0DMU8 189 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 CT45A7P0DMV0 189 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 CPEP16870 476 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 CHRNA7P36544 502 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 SERPINB10P48595 397 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 CX3CL1P78423 397 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 MLLT11Q13015 90 aaPredicted RBP10.2□□□□□ -0.78
RTN3-212ENST00000543123 CD200R1LQ6Q8B3 271 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 C5orf24Q7Z6I8 188 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 OR5AN1Q8NGI8 311 aa10.2□□□□□ -0.78
RTN3-212ENST00000543123 PTX4Q96A99 478 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms