RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 PIPOXQ9P0Z9 390 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 TCF19Q9Y242 345 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 FBN1P35555 2871 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 IGHV1-3A0A0C4DH29 117 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 TIMM23O14925 209 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 RAB29O14966 203 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 TXNL1O43396 289 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 FCER2P06734 321 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 NAT1P18440 290 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 TNFSF8P32971 234 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 ARPC4P59998 168 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 RPL15P61313 204 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 TGIF2LXQ8IUE1 241 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 DRAM1Q8N682 238 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 CFHR4Q92496 578 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 RABL2AQ9UBK7 228 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 RABL2BQ9UNT1 228 aa13.75□□□□□ -0.21
RABGGTA-203ENST00000543002 SAA2-SAA4A0A096LPE2 208 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 A6NDX4 124 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 FAM181BA6NEQ2 426 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 A6NHS1 94 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 FAM90A9PA6NNJ1 464 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 OR3A3P47888 321 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 FAM71F2Q6NXP2 309 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 LIAT1Q6ZQX7 453 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 ZNF833PQ6ZTB9 187 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 MOB3BQ86TA1 216 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 THNSL2Q86YJ6 484 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 OR5AP2Q8NGF4 316 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 OR56B4Q8NH76 319 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 ABHD14BQ96IU4 210 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 NECAP2Q9NVZ3 263 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 PITPNC1Q9UKF7 332 aa13.74□□□□□ -0.21
RABGGTA-203ENST00000543002 OR8U9P0C7N5 309 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 CD24P25063 80 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 PYHIN1Q6K0P9 492 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 CCBE1Q6UXH8 406 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 OR8U1Q8NH10 309 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 CAPSLQ8WWF8 208 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 S1PR3Q99500 378 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 ZNF251Q9BRH9 671 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 RAB18Q9NP72 206 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 ZNF221Q9UK13 617 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 RNF150Q9ULK6 438 aa13.73□□□□□ -0.21
RABGGTA-203ENST00000543002 RNF212BA8MTL3 300 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 CRYBA1P05813 215 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 FAM106CPP0CH98 169 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 NFYAP23511 347 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 S100A5P33763 92 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 RCVRNP35243 200 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 TAS2R46P59540 309 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 MRPS10P82664 201 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 IL18Q14116 193 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 CDK10Q15131 360 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 OR52I2Q8NH67 350 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 SOSTQ9BQB4 213 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 C19orf24Q9BVV8 132 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 GAB2Q9UQC2 676 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 OR2W1Q9Y3N9 320 aa13.72□□□□□ -0.21
RABGGTA-203ENST00000543002 FABP12A6NFH5 140 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 GABARAPH6UMI1 98 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 CTDSPLO15194 276 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 CHST1O43916 411 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 PROP1O75360 226 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 TUSC2O75896 110 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 SNRNP70P08621 437 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 OR5H8P0DN80 308 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 CD1BP29016 333 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 GPR12P47775 334 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 RPL39P5Q59GN2 51 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 RNASE12Q5GAN4 147 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 TMEM219Q86XT9 240 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 LYSMD2Q8IV50 215 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 FCAMRQ8WWV6 532 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 NABP2Q9BQ15 211 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 MRPL20Q9BYC9 149 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 OR2D2Q9H210 308 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 KLK11Q9UBX7 282 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 MTFP1Q9UDX5 166 aa13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 RBM7Q9Y580 266 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-203ENST00000543002 IGHV3-72A0A0B4J1Y9 119 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 RBBP9O75884 186 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 HKR1P10072 659 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 FCGR2CP31995 323 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 LUMP51884 338 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 ACTBP60709 375 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 ACTG1P63261 375 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 LSAMPQ13449 338 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 EBI3Q14213 229 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 FBLN7Q53RD9 439 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 DHRS7BQ6IAN0 325 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 OVCH2Q7RTZ1 564 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 OR5H2Q8NGV7 314 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 MDFIQ99750 246 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 BATF3Q9NR55 127 aa13.7□□□□□ -0.22
RABGGTA-203ENST00000543002 EHFQ9NZC4 300 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms