RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DDTP30046 118 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 RBMXP38159 391 aaKnown RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 CDKN2CP42773 168 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 TGM4P49221 684 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 SRP9P49458 86 aaKnown RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 CEBPGP53567 150 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 TAS2R46P59540 309 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 RAB2AP61019 212 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 SNRPFP62306 86 aaKnown RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 RAP1AP62834 184 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 RBX1P62877 108 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 SLC35A2P78381 396 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 DCDP81605 110 aaKnown RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 RAB31Q13636 194 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 KIR2DS1Q14954 304 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF79Q15937 498 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF239Q16600 458 aaKnown RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM249Q2WGJ8 235 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 C15orf32Q32M92 178 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 KRTAP27-1Q3LI81 207 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 OR10J3Q5JRS4 329 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 TIMM23BQ5SRD1 257 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 IDNKQ5T6J7 187 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 HBMQ6B0K9 141 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 PLET1Q6UQ28 207 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 ACP7Q6ZNF0 438 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 RASSF6Q6ZTQ3 369 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 UBALD2Q8IYN6 164 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 CEND1Q8N111 149 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 STK40Q8N2I9 435 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 GPD1LQ8N335 351 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 LRRC18Q8N456 261 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 COX18Q8N8Q8 333 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 C20orf203Q8NBC4 194 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 UBAC2Q8NBM4 344 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 C19orf18Q8NEA5 215 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 OR5B17Q8NGF7 314 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 OR2D3Q8NGH3 330 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 OR5M1Q8NGP8 315 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 OR9A2Q8NGT5 310 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 OR5AK3PQ8NH89 298 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 S100PBPQ96BU1 408 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 ROPN1LQ96C74 230 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 FLYWCH2Q96CP2 140 aaKnown RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 L3HYPDHQ96EM0 354 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 FAM210BQ96KR6 192 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 FAM19A4Q96LR4 140 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 Q96MT0 163 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 WFIKKN1Q96NZ8 548 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 RBP7Q96R05 134 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 SULT4A1Q9BR01 284 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF2Q9BSG1 426 aaPredicted RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF426Q9BUY5 554 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 PARD6GQ9BYG4 376 aaPredicted RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 NKX6-2Q9C056 277 aaPredicted RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 PARP12Q9H0J9 701 aaKnown RBP2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 C14orf105Q9NVL8 296 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 DDIT4Q9NX09 232 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF226Q9NYT6 803 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 OR12D3Q9UGF7 316 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 SLC7A11Q9UPY5 501 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 FIS1Q9Y3D6 152 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 MYLKQ15746 1914 aa2.83□□□□□ -1.96
SFSWAP-211ENST00000542813 DSPP15924 2871 aaKnown RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 IGSF10Q6WRI0 2623 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF638Q14966 1978 aaKnown RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 A0A0J9YXV3 536 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 A8MT66 165 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 BBIP1A8MTZ0 92 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 D6RAR5 112 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 TSTD3H0UI37 97 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 K7EP13 123 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 TNFRSF11BO00300 401 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 PDCD5O14737 125 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 MYL12BO14950 172 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 PLA2G10O15496 165 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 MPC2O95563 127 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 PPBPP02775 128 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 IFNA6P05013 189 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 CTXN2P0C2S0 81 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 OR56A5P0C7T3 313 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 METTL15P1P0C7V9 234 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF883P0CG24 379 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 HIST1H1BP16401 226 aaKnown RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 MYL12AP19105 171 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 PVALBP20472 110 aaPredicted RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 HTR1DP28221 377 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 SDC4P31431 198 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 S100A11P31949 105 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 PMELP40967 661 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 CYB561P49447 251 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 CRISP3P54108 245 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 OR10A3P58181 314 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 DNAJB13P59910 316 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 ACTBP60709 375 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 UBE2NP61088 152 aaKnown RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 HERVK_113P61574 105 aa2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 RRAS2P62070 204 aaPredicted RBP2.82□□□□□ -1.96
SFSWAP-211ENST00000542813 ACTG1P63261 375 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms