RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MCUBQ9NWR8 336 aa18.78■□□□□ 0.6
HOMER3-205ENST00000542541 PIPOXQ9P0Z9 390 aa18.78■□□□□ 0.6
HOMER3-205ENST00000542541 DPM3Q9P2X0 92 aa18.78■□□□□ 0.6
HOMER3-205ENST00000542541 ZNF221Q9UK13 617 aa18.78■□□□□ 0.6
HOMER3-205ENST00000542541 CDC42EP3Q9UKI2 254 aa18.78■□□□□ 0.6
HOMER3-205ENST00000542541 ST8SIA5O15466 376 aa18.77■□□□□ 0.6
HOMER3-205ENST00000542541 SAA4P35542 130 aa18.77■□□□□ 0.6
HOMER3-205ENST00000542541 BRD3OSQ6XYD6 125 aa18.77■□□□□ 0.6
HOMER3-205ENST00000542541 LYG1Q8N1E2 194 aa18.77■□□□□ 0.6
HOMER3-205ENST00000542541 PIP4P2Q8N4L2 257 aa18.77■□□□□ 0.6
HOMER3-205ENST00000542541 OR56B4Q8NH76 319 aa18.77■□□□□ 0.6
HOMER3-205ENST00000542541 SCP2D1Q9UJQ7 156 aa18.77■□□□□ 0.6
HOMER3-205ENST00000542541 HIVEP2P31629 2446 aa18.77■□□□□ 0.59
HOMER3-205ENST00000542541 NAP1L6A6NFF2 107 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 RAB29O14966 203 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 SLC22A5O76082 557 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 EPHA1P21709 976 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 SCGB2A2Q13296 93 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 FAAP20Q6NZ36 180 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 BORCS5Q969J3 196 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 MALSU1Q96EH3 234 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 IFI27L2Q9H2X8 130 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 RNF150Q9ULK6 438 aa18.76■□□□□ 0.59
HOMER3-205ENST00000542541 LINC00854A0A1B0GVQ3 168 aa18.75■□□□□ 0.59
HOMER3-205ENST00000542541 SCGB2B2Q4G0G5 96 aa18.75■□□□□ 0.59
HOMER3-205ENST00000542541 RUSC1-AS1Q66K80 236 aa18.75■□□□□ 0.59
HOMER3-205ENST00000542541 Q71RC1 249 aaPredicted RBP18.75■□□□□ 0.59
HOMER3-205ENST00000542541 TERB2Q8NHR7 220 aa18.75■□□□□ 0.59
HOMER3-205ENST00000542541 MOB3AQ96BX8 217 aa18.75■□□□□ 0.59
HOMER3-205ENST00000542541 ZNRD1Q9P1U0 126 aa18.75■□□□□ 0.59
HOMER3-205ENST00000542541 FAM96BQ9Y3D0 163 aa18.75■□□□□ 0.59
HOMER3-205ENST00000542541 TEP1Q99973 2627 aaKnown RBP18.75■□□□□ 0.59
HOMER3-205ENST00000542541 ZNF735P0CB33 412 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 GPR12P47775 334 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 FXYD4P59646 89 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 C9orf139Q6ZV77 190 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 IL17RELQ6ZVW7 336 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 OR51S1Q8NGJ8 323 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 S1PR3Q99500 378 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 OR2D2Q9H210 308 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 GAB2Q9UQC2 676 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 ZNF137PP52743 207 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 LPCAT3Q6P1A2 487 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 C16orf87Q6PH81 154 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.74■□□□□ 0.59
HOMER3-205ENST00000542541 RPEQ96AT9 228 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 ABHD14BQ96IU4 210 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 SLC2A8Q9NY64 477 aa18.74■□□□□ 0.59
HOMER3-205ENST00000542541 OOSP1A8MZH6 123 aa18.73■□□□□ 0.59
HOMER3-205ENST00000542541 LY6LH3BQJ8 138 aa18.73■□□□□ 0.59
HOMER3-205ENST00000542541 LHFPL4Q7Z7J7 247 aa18.73■□□□□ 0.59
HOMER3-205ENST00000542541 LHFPL1Q86WI0 220 aa18.73■□□□□ 0.59
HOMER3-205ENST00000542541 SECTM1Q8WVN6 248 aa18.73■□□□□ 0.59
HOMER3-205ENST00000542541 SLC5A7Q9GZV3 580 aa18.73■□□□□ 0.59
HOMER3-205ENST00000542541 ANK3Q12955 4377 aaKnown RBP18.72■□□□□ 0.59
HOMER3-205ENST00000542541 IGKV1D-13A0A0B4J2D9 117 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 GAPDHP04406 335 aaKnown RBP18.72■□□□□ 0.59
HOMER3-205ENST00000542541 IGKV1-13P0DP09 117 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 ECI1P42126 302 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 TPTE2P1Q5T6R2 138 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 IDO2Q6ZQW0 420 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 ODF3L1Q8IXM7 274 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 ZNF645Q8N7E2 425 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 TOMM40LQ969M1 308 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 ST6GALNAC6Q969X2 333 aa18.72■□□□□ 0.59
HOMER3-205ENST00000542541 SAA2-SAA4A0A096LPE2 208 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 OR5H14A6NHG9 310 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 SAA2P0DJI9 122 aaPredicted RBP18.71■□□□□ 0.59
HOMER3-205ENST00000542541 ARHGDIBP52566 201 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 UCP3P55916 312 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 MSMO1Q15800 293 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 SSX2Q16385 188 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 PLA1AQ53H76 456 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 AADACL3Q5VUY0 350 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 CCDC144NLQ6NUI1 221 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 FAM71F2Q6NXP2 309 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 HILPDAQ9Y5L2 63 aa18.71■□□□□ 0.59
HOMER3-205ENST00000542541 A0A0U1RQK1 487 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 INAFM1C9JVW0 142 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 HSD17B6O14756 317 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 PLA2G10O15496 165 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 LYRM1O43325 122 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 TXNL1O43396 289 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 FBP1P09467 338 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 SRD5A1P18405 259 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 DEFA1P59665 94 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 DEFA3P59666 94 aa18.71■□□□□ 0.58
HOMER3-205ENST00000542541 SONP18583 2426 aaKnown RBP18.7■□□□□ 0.58
HOMER3-205ENST00000542541 SVEP1Q4LDE5 3571 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 IFITM3Q01628 133 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 ZNF816Q0VGE8 651 aaPredicted RBP18.7■□□□□ 0.58
HOMER3-205ENST00000542541 SURF2Q15527 256 aaPredicted RBP18.7■□□□□ 0.58
HOMER3-205ENST00000542541 LDLRAD2Q5SZI1 272 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 MZT2BQ6NZ67 158 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 ZNF833PQ6ZTB9 187 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 LDLRAD3Q86YD5 345 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 TGIF2LXQ8IUE1 241 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 ZBTB34Q8NCN2 500 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 AKR1E2Q96JD6 320 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 SCGB3A2Q96PL1 93 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms