RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 NPIPB13A6NJU9 1138 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 LGALS16A8MUM7 142 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF732B4DXR9 585 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 HNRNPCL3B7ZW38 293 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 NPIPB4C9JG80 1138 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 M0R135 149 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 SDHDO14521 159 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 HNRNPCL1O60812 293 aaKnown RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 SULT1C4O75897 302 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 NDUFA3O95167 84 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 KRT14P02533 472 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 IL6P05231 212 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 HNRNPCL4P0DMR1 293 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 STMN1P16949 149 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 CFL1P23528 166 aaKnown RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 SOAT1P35610 550 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ARL3P36405 182 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 MAGEA12P43365 314 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 RPS6KA3P51812 740 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 GRB2P62993 217 aaKnown RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 HIST1H3AP68431 136 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 FAM3AP98173 230 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 PRKCDQ05655 676 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 GAGE5Q13069 117 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 GAGE6Q13070 117 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 PRDX4Q13162 271 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 RIGQ13278 110 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 EIF2B1Q14232 305 aaKnown RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 FXYD3Q14802 87 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF74Q16587 644 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 RRN3P1Q2M238 152 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 SPANXN3Q5MJ09 141 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 LCE3CQ5T5A8 94 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 HIST2H3PS2Q5TEC6 136 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 NXNL2Q5VZ03 156 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 GLT8D1Q68CQ7 371 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 CORO6Q6QEF8 472 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 SASS6Q6UVJ0 657 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 LRRC74BQ6ZQY2 392 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 HIST2H3AQ71DI3 136 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 CENPQQ7L2Z9 268 aaPredicted RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 NANOGNBQ7Z5D8 188 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZC3HC1Q86WB0 502 aaKnown RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 KRTAP11-1Q8IUC1 163 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 SERPINA12Q8IW75 414 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF555Q8NEP9 628 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR4C16Q8NGL9 310 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR5AK3PQ8NH89 298 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 GRPEL2Q8TAA5 225 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 MIPOL1Q8TD10 442 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 GTSF1Q8WW33 167 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 GHSRQ92847 366 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC35B4Q969S0 331 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 MTERF3Q96E29 417 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 CERS2Q96G23 380 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 PGAM5Q96HS1 289 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 APOPT1Q96IL0 206 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC35G5Q96KT7 338 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR2A7Q96R45 310 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 CLCC1Q96S66 551 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 LINC00467Q9BRT7 94 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 CHST6Q9GZX3 395 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 FBXL15Q9H469 300 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 Q9HAA7 133 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ROPN1Q9HAT0 212 aaPredicted RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 CACYBPQ9HB71 228 aaKnown RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ABCD2Q9UBJ2 740 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 GIMAP2Q9UG22 337 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF229Q9UJW7 825 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 ANGPT4Q9Y264 503 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 KCNK7Q9Y2U2 307 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 POLR3HQ9Y535 204 aaPredicted RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 A0A096LPF7 62 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 TCRBV7S3A2A0A539 114 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 hDV102S1A0JD36 115 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 RNF222A6NCQ9 220 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 HMX3A6NHT5 357 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 A6NIZ1 184 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 FAM90A7PA6NKC0 464 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 FAM90A23PA8MXZ1 464 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 IBA57-AS1B1ANH7 110 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF878C9JN71 531 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 DNASE2O00115 360 aaPredicted RBP1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 SLC22A1O15245 554 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 TPST2O60704 377 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 CCNKO75909 580 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 CST4P01036 141 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 CD5P06127 495 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 ASAH2BP0C7U1 165 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 HTR1FP30939 366 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 SERPINB5P36952 375 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 MAGEA3P43357 314 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR1E2P47887 323 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 SERPINB9P50453 376 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 FUT6P51993 359 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 HADHBP55084 474 aaKnown RBP1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR2B8PP59922 312 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 RAP1BP61224 184 aa1.25□□□□□ -2.21
TRAV1-1-201ENST00000542354 RAP1AP62834 184 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms