RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 OR2D2Q9H210 308 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ISG20L2Q9H9L3 353 aaKnown RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 SPANXB1Q9NS25 103 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PIGVQ9NUD9 493 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PLA2G3Q9NZ20 509 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 THAP10Q9P2Z0 257 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ANXA10Q9UJ72 324 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 VSIG4Q9Y279 399 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 MED31Q9Y3C7 131 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 RFNGQ9Y644 331 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 SIRT4Q9Y6E7 314 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PLXND1Q9Y4D7 1925 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF236Q9UL36 1845 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 NUP210LQ5VU65 1888 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TRAV18A0A075B6X5 111 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TRAV8-6A0A0B4J262 113 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TRBV5-5A0A0J9YX44 114 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 A0A1W2PPC4 97 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 A0A1W2PRE2 83 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ODAMA1E959 279 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF785A8K8V0 405 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 C21orf140B9A014 251 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 E9PLN8 166 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 J3KTA2 159 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 IFNL4K9M1U5 179 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 SLC17A2O00624 439 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 CRXO43186 299 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF217O75362 1048 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 PITX3O75364 302 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 FCN3O75636 299 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 DHRS3O75911 302 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 CPSF4O95639 269 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 SPINK8P0C7L1 97 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF728P0DKX0 622 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF708P17019 499 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ALOX5APP20292 161 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 CSRP1P21291 193 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 FBLP22087 321 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 SFTPDP35247 375 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 PPP1CCP36873 323 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TSFMP43897 325 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 OR1E2P47887 323 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 UQCRFS1P47985 274 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 LIM2P55344 173 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 RPL27P61353 136 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 RPS11P62280 158 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 HHEXQ03014 270 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 MFGE8Q08431 387 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ACSM2AQ08AH3 577 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 INSL4Q14641 139 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ITPRIPL2Q3MIP1 535 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 DCAF4L1Q3SXM0 396 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF260Q3ZCT1 412 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TIMM23BQ5SRD1 257 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 FBXL22Q6P050 247 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF880Q6PDB4 577 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 STAC2Q6ZMT1 411 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TPRG1Q6ZUI0 275 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 BCDIN3DQ7Z5W3 292 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 BAGE3Q86Y29 109 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 BAGE2Q86Y30 109 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 SAXO1Q8IYX7 474 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 LRRC25Q8N386 305 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TEX29Q8N6K0 151 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 SIRT6Q8N6T7 355 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 OR52E2Q8NGJ4 325 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 OR10G9Q8NGN4 311 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 OR10G8Q8NGN5 311 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 OR10AG1Q8NH19 301 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNRF2Q8NHG8 242 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 FNDC9Q8TBE3 224 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF502Q8TBZ5 544 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 RNF128Q8TEB7 428 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 GLYATL1Q969I3 302 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 MAL2Q969L2 176 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 RNF183Q96D59 192 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 RNF125Q96EQ8 232 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 KCNS1Q96KK3 526 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TSSK2Q96PF2 358 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TRIB1Q96RU8 372 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 SPIN2AQ99865 258 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 RARRES2Q99969 163 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 SPIN2BQ9BPZ2 258 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 MRPL32Q9BYC8 188 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 MAP1LC3AQ9H492 121 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 BCL2L10Q9HD36 194 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 NRN1Q9NPD7 142 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 THYN1Q9P016 225 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 NXT1Q9UKK6 140 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 DHDHQ9UQ10 334 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 VDAC3Q9Y277 283 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF257Q9Y2Q1 563 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 LIPGQ9Y5X9 500 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 ANKRD36A6QL64 1941 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 TSC2P49815 1807 aa3.69□□□□□ -1.82
SNHG1-219ENST00000542112 NYNRINQ9P2P1 1898 aaKnown RBP3.69□□□□□ -1.82
SNHG1-219ENST00000542112 GOLGB1Q14789 3259 aaKnown RBP3.68□□□□□ -1.82
SNHG1-219ENST00000542112 MIA3Q5JRA6 1907 aa3.68□□□□□ -1.82
SNHG1-219ENST00000542112 A0A087WWL8 130 aa3.68□□□□□ -1.82
SNHG1-219ENST00000542112 TRBV5-7A0A0A0MS05 114 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms