RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 ACOT12Q8WYK0 555 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 TMEM159Q96B96 161 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 DIRAS2Q96HU8 199 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 PGLYRP3Q96LB9 341 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 KCTD7Q96MP8 289 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 ERMAPQ96PL5 475 aaPredicted RBP3.65□□□□□ -1.83
CIT-211ENST00000541841 HBEGFQ99075 208 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 MGLLQ99685 303 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 MED18Q9BUE0 208 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 GLTPQ9NZD2 209 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 TIMM22Q9Y584 194 aa3.65□□□□□ -1.83
CIT-211ENST00000541841 LAMA2P24043 3122 aaKnown RBP3.65□□□□□ -1.83
CIT-211ENST00000541841 ANKRD12Q6UB98 2062 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 IGKV1-27A0A075B6S5 117 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 CCL15-CCL14A0A0B4J2E2 113 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 LOC105371267A0A1B0GV96 52 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 LOC285095A0A1B0GVY8 99 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 EPOPA6NHQ4 379 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 KRBOX1C9JBD0 128 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 F5H5T6 163 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 F5H768 121 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 I3L521 148 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 M0QZ92 97 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 CRXO43186 299 aaPredicted RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 CD5LO43866 347 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 DHRS3O75911 302 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 TRBV12-3P01733 135 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 MMP7P09237 267 aaPredicted RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 OR56A5P0C7T3 313 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 ZDHHC11BP0C7U3 371 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 CCL5P13501 91 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 HLA-EP13747 358 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 DRD3P35462 400 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 IDH2P48735 452 aaKnown RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 DAPP51397 102 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 FOXA1P55317 472 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 SYNJ2BPP57105 145 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 S100A12P80511 92 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 MLLT11Q13015 90 aaPredicted RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 CCL15Q16663 113 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 RSPO1Q2MKA7 263 aaPredicted RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 CEACAM16Q2WEN9 425 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 SLC36A2Q495M3 483 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 COX19Q49B96 90 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 C6orf99Q4VX62 202 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 PYCR3Q53H96 274 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 C9orf129Q5T035 196 aaKnown RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 SYPL2Q5VXT5 272 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 LYPD2Q6UXB3 125 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 CYHR1Q6ZMK1 362 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 RPS27LQ71UM5 84 aaKnown RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 TAC4Q86UU9 113 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 SNX29P2Q8IUI4 249 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 DEFB123Q8N688 67 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 YIPF7Q8N8F6 280 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 OR10G2Q8NGC3 310 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 PPTC7Q8NI37 304 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 LHFPL5Q8TAF8 219 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 RXFP4Q8TDU9 374 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 ZNF431Q8TF32 576 aaPredicted RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 BLNKQ8WV28 456 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 RERGQ96A58 199 aaPredicted RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 TMEM243Q9BU79 118 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 TMED9Q9BVK6 235 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 MED28Q9H204 178 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 METTL8Q9H825 291 aaKnown RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 FBXL12Q9NXK8 326 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 BAIAP2Q9UQB8 552 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 ANGPT4Q9Y264 503 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 HSPB11Q9Y547 144 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 NUP205Q92621 2012 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 MUC3AQ02505 3323 aa3.64□□□□□ -1.83
CIT-211ENST00000541841 NYNRINQ9P2P1 1898 aaKnown RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 SPTBN5Q9NRC6 3674 aaKnown RBP3.64□□□□□ -1.83
CIT-211ENST00000541841 PRUNE2Q8WUY3 3088 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 RBFOX3A6NFN3 312 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 INMT-MINDY4F8WBC2 141 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 H0Y980 276 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 MANBAO00462 879 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 SLC31A1O15431 190 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 LYRM1O43325 122 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 HPGDSO60760 199 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 SLC22A5O76082 557 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 VAMP5O95183 116 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 HLA-DQB1P01920 261 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 CD74P04233 296 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 DNAH10OSP0CZ25 163 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 SPNP16150 400 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 GPX2P18283 190 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 RPS3P23396 243 aaKnown RBP eCLIP3.63□□□□□ -1.83
CIT-211ENST00000541841 HTR1DP28221 377 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 CTRLP40313 264 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 PPOXP50336 477 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 ACTBP60709 375 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 HERVK_113P61574 105 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 RPL23P62829 140 aaKnown RBP3.63□□□□□ -1.83
CIT-211ENST00000541841 ACTG1P63261 375 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 GINS1Q14691 196 aa3.63□□□□□ -1.83
CIT-211ENST00000541841 TOMM34Q15785 309 aaPredicted RBP3.63□□□□□ -1.83
CIT-211ENST00000541841 TMEM183BQ1AE95 376 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms