RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 IMPA1P29218 277 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 PEBP1P30086 187 aaKnown RBP4.36□□□□□ -1.71
DDB1-219ENST00000541513 S100A7P31151 101 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 FMODQ06828 376 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 EIF3IQ13347 325 aaKnown RBP4.36□□□□□ -1.71
DDB1-219ENST00000541513 EDDM3AQ14507 147 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 RBMS2Q15434 407 aaKnown RBP4.36□□□□□ -1.71
DDB1-219ENST00000541513 OR8G1Q15617 311 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 NSDHLQ15738 373 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 PLPPR5Q32ZL2 321 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 CCSMST1Q4G0I0 132 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 ZNF585BQ52M93 769 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 HIST2H3PS2Q5TEC6 136 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 HES3Q5TGS1 186 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 RUSC1-AS1Q66K80 236 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 OR2T5Q6IEZ7 315 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 XKRXQ6PP77 449 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 AGTRAPQ6RW13 159 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 SMARCD3Q6STE5 483 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 C12orf54Q6X4T0 127 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 Q6ZN92 141 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 LRRTM1Q86UE6 522 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 NFE4Q86UQ8 179 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 C9orf40Q8IXQ3 194 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 C4orf33Q8N1A6 199 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 CADM2Q8N3J6 435 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 METTL27Q8N6F8 245 aaPredicted RBP4.36□□□□□ -1.71
DDB1-219ENST00000541513 LINC01555Q8NAE3 123 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 OR4E2Q8NGC2 313 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 OR2T29Q8NH02 315 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 OR1P1Q8NH06 330 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 PRSS3P2Q8NHM4 247 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 STAG3L4Q8TBR4 150 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 NT5CQ8TCD5 201 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 ASB13Q8WXK3 278 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 CHCHD10Q8WYQ3 142 aaPredicted RBP4.36□□□□□ -1.71
DDB1-219ENST00000541513 PYURFQ96I23 114 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 PGLYRP4Q96LB8 373 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 FAM19A4Q96LR4 140 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 DUX3Q96PT4 197 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 ATOH8Q96SQ7 321 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 CCDC32Q9BV29 185 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 MS4A8Q9BY19 250 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 C20orf85Q9H1P6 137 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 EXOSC4Q9NPD3 245 aaKnown RBP4.36□□□□□ -1.71
DDB1-219ENST00000541513 BTRCQ9Y297 605 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 PTPRQQ9UMZ3 2332 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 DMXL2Q8TDJ6 3036 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 FREM2Q5SZK8 3169 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 CROCCQ5TZA2 2017 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 SCN2AQ99250 2005 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 MAP1BP46821 2468 aaKnown RBP4.35□□□□□ -1.71
DDB1-219ENST00000541513 TRAV39A0A0B4J263 110 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 A0A0B4J2A0 478 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 IGHV5-10-1A0A0J9YXX1 117 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 A0A0J9YY10 115 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 LEUTXA8MZ59 168 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 ZNF878C9JN71 531 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 LINC01619G3V211 115 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 LYPLA1O75608 230 aaPredicted RBP4.35□□□□□ -1.71
DDB1-219ENST00000541513 UPK1BO75841 260 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 TNFSF15O95150 251 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 VENTXO95231 258 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 SERPINA7P05543 415 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 OR8U8P0C7N1 319 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 CD37P11049 281 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 GPX2P18283 190 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 RCC1P18754 421 aaPredicted RBP4.35□□□□□ -1.71
DDB1-219ENST00000541513 OPRL1P41146 370 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 LGALS7P47929 136 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 GFERP55789 205 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 TCL1AP56279 114 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 PPP1CAP62136 330 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 SELENOTP62341 195 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 GNG3P63215 75 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 CD300CQ08708 224 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 OR1Q1Q15612 314 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 LRRC75BQ2VPJ9 315 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 KIAA1644Q3SXP7 199 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 TMEM97Q5BJF2 176 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 FAM78BQ5VT40 261 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 ZNF324BQ6AW86 544 aaPredicted RBP4.35□□□□□ -1.71
DDB1-219ENST00000541513 TNFAIP8L2Q6P589 184 aaPredicted RBP4.35□□□□□ -1.71
DDB1-219ENST00000541513 SCIMPQ6UWF3 145 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 ZNF788Q6ZQV5 615 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 FAM231DQ6ZW35 169 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 SMIM20Q8N5G0 67 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 ARIH2OSQ8N7S6 290 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 GDPD1Q8N9F7 314 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 Q8WTZ3 238 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.35□□□□□ -1.71
DDB1-219ENST00000541513 UCN3Q969E3 161 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 TM4SF18Q96CE8 201 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 ZNF382Q96SR6 550 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 NRTNQ99748 197 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 MRPL57Q9BQC6 102 aaKnown RBP4.35□□□□□ -1.71
DDB1-219ENST00000541513 RNF126Q9BV68 326 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 TBL1XR1Q9BZK7 514 aa4.35□□□□□ -1.71
DDB1-219ENST00000541513 MOB1AQ9H8S9 216 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms