RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 LURAP1Q96LR2 239 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 PSMG3-AS1Q96PY0 264 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 TAF9BQ9HBM6 251 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 TNFSF18Q9UNG2 199 aa14.1□□□□□ -0.15
COPS3-212ENST00000539941 ADGRG4Q8IZF6 3080 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 RNF222A6NCQ9 220 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 CRYM-AS1A6NIL9 109 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 NDUFS6O75380 124 aaKnown RBP14.09□□□□□ -0.15
COPS3-212ENST00000539941 ZNF205O95201 554 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 MT-ND4LP03901 98 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 PPOXP50336 477 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 RAB5CP51148 216 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 SUPT4H1P63272 117 aaKnown RBP14.09□□□□□ -0.15
COPS3-212ENST00000539941 ZCCHC24Q8N2G6 241 aaKnown RBP14.09□□□□□ -0.15
COPS3-212ENST00000539941 CCDC71LQ8N9Z2 235 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 OR5M8Q8NGP6 311 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 STOML3Q8TAV4 291 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 CASTOR1Q8WTX7 329 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 FAM234AQ9H0X4 552 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 TUBA4BQ9H853 241 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 ROS1P08922 2347 aa14.09□□□□□ -0.15
COPS3-212ENST00000539941 ARFGEF3Q5TH69 2177 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 TRAV38-1A0A0B4J264 116 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 COLCA2A8K830 154 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 TFF1P04155 84 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 PIGPP57054 158 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 C2orf68Q2NKX9 166 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 FAM201AQ5SY85 155 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 OR1S2Q8NGQ3 325 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 EDARADDQ8WWZ3 215 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 PFDN5Q99471 154 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 ZNF665Q9H7R5 613 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 SLC2A9Q9NRM0 540 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 TMEM106BQ9NUM4 274 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 OR2W1Q9Y3N9 320 aa14.08□□□□□ -0.16
COPS3-212ENST00000539941 TMEM178BH3BS89 294 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 IFNA2P01563 188 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 IFNA10P01566 189 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 ADCYAP1P18509 176 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 LUMP51884 338 aaPredicted RBP14.07□□□□□ -0.16
COPS3-212ENST00000539941 RND3P61587 244 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 CR1LQ2VPA4 569 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 OR2B11Q5JQS5 317 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 ZNF788Q6ZQV5 615 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 ZNF565Q8N9K5 539 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 RNF141Q8WVD5 230 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 GALNT14Q96FL9 552 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 ZNF471Q9BX82 626 aaPredicted RBP14.07□□□□□ -0.16
COPS3-212ENST00000539941 KCNIP3Q9Y2W7 256 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 POMT1Q9Y6A1 747 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 TANC2Q9HCD6 1990 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 TRAV14DV4A0A0A6YYC5 116 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 TRAV39A0A0B4J263 110 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 TEX13DA0A0J9YY54 714 aaPredicted RBP14.07□□□□□ -0.16
COPS3-212ENST00000539941 ODAMA1E959 279 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 NKX6-3A6NJ46 265 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 C12orf77C9JDV5 145 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 IGFBP2P18065 325 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 GLIPR1P48060 266 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 C5orf24Q7Z6I8 188 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 RTN4IP1Q8WWV3 396 aaPredicted RBP14.07□□□□□ -0.16
COPS3-212ENST00000539941 IL1F10Q8WWZ1 152 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 GALMQ96C23 342 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 GAFA1Q96PS6 74 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 TOLLIPQ9H0E2 274 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 NAA60Q9H7X0 242 aa14.07□□□□□ -0.16
COPS3-212ENST00000539941 NBPF19A0A087WUL8 3843 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 PPIAL4EA0A075B759 164 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 PPIAL4DF5H284 164 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 SIGLEC5O15389 551 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 HSPA12AO43301 675 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 PPIAL4FP0DN26 164 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 SELLP14151 372 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 GZMHP20718 246 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 GNRHRP30968 328 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 RBMXP38159 391 aaKnown RBP14.06□□□□□ -0.16
COPS3-212ENST00000539941 PJVKQ0ZLH3 352 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 SLC9A3R2Q15599 337 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 LY6G6FQ5SQ64 297 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 C11orf87Q6NUJ2 197 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 ZFP82Q8N141 532 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 VRK1Q99986 396 aaPredicted RBP14.06□□□□□ -0.16
COPS3-212ENST00000539941 SLC5A7Q9GZV3 580 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 RAB18Q9NP72 206 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 RAB9BQ9NP90 201 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 TREM1Q9NP99 234 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 CBLN4Q9NTU7 201 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 UQCC1Q9NVA1 299 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 PPIAL4AQ9Y536 164 aa14.06□□□□□ -0.16
COPS3-212ENST00000539941 PKDREJQ9NTG1 2253 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 DSCAMO60469 2012 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 IGHV1-69-2A0A0G2JMI3 117 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 HBZP02008 142 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 TPT1P13693 172 aaKnown RBP14.05□□□□□ -0.16
COPS3-212ENST00000539941 IL2RGP31785 369 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 EDDM3AQ14507 147 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 RBMS3Q6XE24 437 aaKnown RBP14.05□□□□□ -0.16
COPS3-212ENST00000539941 KCTD9Q7L273 389 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 TGIF2LYQ8IUE0 185 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 ZNRF1Q8ND25 227 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms