RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GPR87Q9BY21 358 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 ZNF703Q9H7S9 590 aaPredicted RBP8.17□□□□□ -1.1
CDH13-204ENST00000539548 HSPB7Q9UBY9 170 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 TRAPPC2LQ9UL33 140 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 KCNS2Q9ULS6 477 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 WIPI2Q9Y4P8 454 aa8.17□□□□□ -1.1
CDH13-204ENST00000539548 RBM7Q9Y580 266 aaKnown RBP8.17□□□□□ -1.1
CDH13-204ENST00000539548 CTXND1A0A1B0GTU2 59 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 UBE2L5PA0A1B0GUS4 154 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 A0A1W2PR80 420 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 MBP02144 154 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 CD55P08174 381 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 CELA3AP09093 270 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 CEACAM6P40199 344 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 ERVK11-1P61568 191 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 RPL23P62829 140 aaKnown RBP8.16□□□□□ -1.1
CDH13-204ENST00000539548 COL10A1Q03692 680 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 DCAF12Q5T6F0 453 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.16□□□□□ -1.1
CDH13-204ENST00000539548 Q8IYB0 196 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 OR1K1Q8NGR3 316 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 OR1P1Q8NH06 330 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 CT55Q8WUE5 264 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 MBNL3Q9NUK0 354 aaKnown RBP8.16□□□□□ -1.1
CDH13-204ENST00000539548 B4GALT7Q9UBV7 327 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 ARHGAP21Q5T5U3 1957 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 WDR87Q6ZQQ6 2873 aa8.16□□□□□ -1.1
CDH13-204ENST00000539548 MKRN2OSH3BPM6 223 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 SIRPB1O00241 398 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 WDR1O75083 606 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 OR2H2O95918 312 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 P0C879 139 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 SPINK2P20155 84 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 MDKP21741 143 aaPredicted RBP8.15□□□□□ -1.1
CDH13-204ENST00000539548 MSMO1Q15800 293 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 OR8G2PQ6IF36 304 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 ACSM6Q6P461 480 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 C6orf15Q6UXA7 325 aaPredicted RBP8.15□□□□□ -1.1
CDH13-204ENST00000539548 DBX2Q6ZNG2 339 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 ZBTB34Q8NCN2 500 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 RTL8AQ9BWD3 113 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 ACTR3CQ9C0K3 210 aaPredicted RBP8.15□□□□□ -1.1
CDH13-204ENST00000539548 SMOC1Q9H4F8 434 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 GP6Q9HCN6 339 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 MANBALQ9NQG1 85 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 KIAA2026Q5HYC2 2103 aa8.15□□□□□ -1.1
CDH13-204ENST00000539548 A0A087X0M5 115 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 A0A1B0GX30 115 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 H7BYZ3 331 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 NEURL1O76050 574 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 CLDN1O95832 211 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 AMBPP02760 352 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 GZMHP20718 246 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 GALR1P47211 349 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 FAM180AQ6UWF9 173 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 TIPARPQ7Z3E1 657 aaKnown RBP8.15□□□□□ -1.11
CDH13-204ENST00000539548 PRR18Q8N4B5 295 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 ANAPC16Q96DE5 110 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 THOC3Q96J01 351 aaKnown RBP8.15□□□□□ -1.11
CDH13-204ENST00000539548 OR5B12Q96R08 314 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 TMEM147Q9BVK8 224 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 MRPL37Q9BZE1 423 aaKnown RBP8.15□□□□□ -1.11
CDH13-204ENST00000539548 PRO1933Q9H354 126 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 GAB2Q9UQC2 676 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 LAMP3Q9UQV4 416 aa8.15□□□□□ -1.11
CDH13-204ENST00000539548 PMS2P5A8MQ11 134 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 PPP5D1E7EU14 171 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 SH2D1BO14796 132 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 GZMBP10144 247 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 FGF7P21781 194 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 PDLIM4P50479 330 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 PEAR1Q5VY43 1037 aaPredicted RBP8.14□□□□□ -1.11
CDH13-204ENST00000539548 SSX9Q7RTT3 188 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 NUFIP2Q7Z417 695 aaKnown RBP8.14□□□□□ -1.11
CDH13-204ENST00000539548 WDR86Q86TI4 376 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 SCCPDHQ8NBX0 429 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 OR10G9Q8NGN4 311 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 OR10G7Q8NGN6 311 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 RPUSD4Q96CM3 377 aaKnown RBP8.14□□□□□ -1.11
CDH13-204ENST00000539548 ACY3Q96HD9 319 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 IER2Q9BTL4 223 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 PARLQ9H300 379 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.14□□□□□ -1.11
CDH13-204ENST00000539548 POLDIP2Q9Y2S7 368 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 MYO15AQ9UKN7 3530 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 XKRY2A2RUG3 117 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 LRRC30A6NM36 301 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 VENTXO95231 258 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 MT-CO3P00414 261 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 HRASP01112 189 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 GCGP01275 180 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 FAM3BP58499 235 aaPredicted RBP8.14□□□□□ -1.11
CDH13-204ENST00000539548 ZNF146Q15072 292 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 IGFBP7Q16270 282 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 ZNF645Q8N7E2 425 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 UBALD1Q8TB05 177 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 TMEM170AQ8WVE7 144 aa8.14□□□□□ -1.11
CDH13-204ENST00000539548 BCL2L2Q92843 193 aaPredicted RBP8.14□□□□□ -1.11
CDH13-204ENST00000539548 MED12LQ86YW9 2145 aa8.13□□□□□ -1.11
CDH13-204ENST00000539548 PATE3B3GLJ2 98 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms