RNA–Protein interactions for RNA: ENST00000538708.5

PTPRB-204, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-204ENST00000538708 TMPRSS5Q9H3S3 457 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 WSB1Q9Y6I7 421 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 DSPPQ9NZW4 1301 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 SCN10AQ9Y5Y9 1956 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 RGS13O14921 159 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 IFI6P09912 130 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 CAMPP49913 170 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 ERVS71-1P61550 626 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 PRSS54Q6PEW0 395 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 RFLNBQ8N5W9 214 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 TRAV30A0A087WSZ9 112 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 ARPC4-TTLL3A0A0A6YYG9 625 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 MFSD2BA6NFX1 497 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 SCTP09683 121 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 MVDP53602 400 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 RIGQ13278 110 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 LINC00299Q6ZSB3 139 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 JPT1Q9UK76 154 aa8.12□□□□□ -1.11
PTPRB-204ENST00000538708 KIAA1324LA8MWY0 1029 aaPredicted RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 TRIM77I1YAP6 450 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 SRSF10O75494 262 aaKnown RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 ADAP1O75689 374 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 MUC1P15941 1255 aaPredicted RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 FCGR2BP31994 310 aaPredicted RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 OR5P3Q8WZ94 311 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 MRPL24Q96A35 216 aaKnown RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 WISP3O95389 354 aaPredicted RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 IGKV1D-33P01593 117 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 IGKV1-33P01594 117 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 SCGB1C2P0DMR2 95 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 GLIPR1P48060 266 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 HOGA1Q86XE5 327 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 DLL3Q9NYJ7 618 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 IGKV3D-11A0A0A0MRZ8 115 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 NTN3O00634 580 aaPredicted RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 CXorf1O96002 111 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 OR5AL1P0C617 328 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 GUK1Q16774 197 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 C1QTNF12Q5T7M4 302 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 FBXL17Q9UF56 701 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 GON4LQ3T8J9 2241 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 IGLV1-36A0A0B4J1U3 117 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 MPC2O95563 127 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 RD3LP0DJH9 198 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 USF1P22415 310 aaPredicted RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 NHLH1Q02575 133 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 NHLH2Q02577 135 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 TWIST1Q15672 202 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 LYZL2Q7Z4W2 148 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 C10orf111Q8N326 155 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 ITLN2Q8WWU7 325 aaPredicted RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 FAM210BQ96KR6 192 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 ZNF107Q9UII5 783 aaPredicted RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 TCRBV4S1A1TA0A5B7 111 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 C17orf51A8MQB3 221 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 C1QCP02747 245 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 HPXP02790 462 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 FAM157CP0CG43 387 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 RPL7P18124 248 aaKnown RBP8.11□□□□□ -1.11
PTPRB-204ENST00000538708 CTF1Q16619 201 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 SSC4DQ8WTU2 575 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 FAM216AQ8WUB2 273 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 IMMP1LQ96LU5 166 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 AKIP1Q9NQ31 210 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 SPRR3Q9UBC9 169 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 MYO7AQ13402 2215 aa8.11□□□□□ -1.11
PTPRB-204ENST00000538708 C11orf94C9JXX5 98 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 TGOLN2O43493 480 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 OR2A4O95047 310 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 TMEM30BQ3MIR4 351 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 SAXO1Q8IYX7 474 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 OR2A7Q96R45 310 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 NPFFR1Q9GZQ6 430 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 AP5S1Q9NUS5 200 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 DCAF16Q9NXF7 216 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 PEMTQ9UBM1 199 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 PROB1E7EW31 1015 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 IGKV3-20P01619 116 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 SULT1A1P50225 295 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 RANP62826 216 aaKnown RBP8.1□□□□□ -1.11
PTPRB-204ENST00000538708 PSG9Q00887 426 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 C19orf54Q5BKX5 351 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 SCN3AQ9NY46 2000 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 PATJQ8NI35 1801 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 CTDSPLO15194 276 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 ZIC3O60481 467 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 HSBP1O75506 76 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 TSPOP30536 169 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 GZMKP49863 264 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 RNF212Q495C1 297 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 FAM201AQ5SY85 155 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 ZNRF1Q8ND25 227 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 WDFY2Q96P53 400 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 TRBV5-3A0A0A0MS03 114 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 LMX1BO60663 402 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 ADAM11O75078 769 aa8.1□□□□□ -1.11
PTPRB-204ENST00000538708 ADRB1P08588 477 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms