RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TOR1AO14656 332 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 IAPPP10997 89 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 ATF4P18848 351 aaPredicted RBP13.08□□□□□ -0.32
MKS1-204ENST00000537529 GZMHP20718 246 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 CD40P25942 277 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 GATA4P43694 442 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 TMEM267Q0VDI3 215 aaPredicted RBP13.08□□□□□ -0.32
MKS1-204ENST00000537529 FAM74A3Q4VXF1 159 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 FAM53AQ6NSI3 398 aaPredicted RBP13.08□□□□□ -0.32
MKS1-204ENST00000537529 CISD2Q8N5K1 135 aaKnown RBP13.08□□□□□ -0.32
MKS1-204ENST00000537529 FAM216AQ8WUB2 273 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 EDARADDQ8WWZ3 215 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 MRPL37Q9BZE1 423 aaKnown RBP13.08□□□□□ -0.32
MKS1-204ENST00000537529 ELOVL5Q9NYP7 299 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 IGHV3-43A0A0B4J1X8 118 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 A0A0G2JNJ9 132 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 LHBP01229 141 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 IFNA5P01569 189 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 IGHV3-43DP0DP04 118 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 CCKARP32238 428 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 RPL30P62888 115 aaKnown RBP13.07□□□□□ -0.32
MKS1-204ENST00000537529 GTF3C1Q12789 2109 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 SPRNQ5BIV9 151 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 GFRALQ6UXV0 394 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 HSD17B10Q99714 261 aaKnown RBP13.07□□□□□ -0.32
MKS1-204ENST00000537529 DCTN5Q9BTE1 182 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 PBDC1Q9BVG4 233 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 Q9UFV3 132 aa13.07□□□□□ -0.32
MKS1-204ENST00000537529 RAMP3O60896 148 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 CLDN1O95832 211 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 TNFSF4P23510 183 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 ZNF816Q0VGE8 651 aaPredicted RBP13.06□□□□□ -0.32
MKS1-204ENST00000537529 TBR1Q16650 682 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 GUK1Q16774 197 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 OR2B11Q5JQS5 317 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 BTNL3Q6UXE8 466 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 NUP37Q8NFH4 326 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 JPT1Q9UK76 154 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 PSG11Q9UQ72 335 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 LAMP3Q9UQV4 416 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 KPTNQ9Y664 436 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 FAM157AC9JC47 383 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 C16orf97H3BN30 126 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 TNFAIP6P98066 277 aaPredicted RBP13.06□□□□□ -0.32
MKS1-204ENST00000537529 CR1LQ2VPA4 569 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 Q3ZCU0 254 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 SLC25A24Q6NUK1 477 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 TMEM108Q6UXF1 575 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 Q8NA96 180 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 KCNJ16Q9NPI9 418 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 GNG12Q9UBI6 72 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 IL19Q9UHD0 177 aa13.06□□□□□ -0.32
MKS1-204ENST00000537529 C17orf98A8MV24 154 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 C9JQL5 133 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 ST8SIA5O15466 376 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 S1PR2O95136 353 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 P0C879 139 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 HBG1P69891 147 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 HBG2P69892 147 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 AKR1C8PQ5T2L2 129 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 EIF5A2Q9GZV4 153 aaKnown RBP13.05□□□□□ -0.32
MKS1-204ENST00000537529 RNF7Q9UBF6 113 aa13.05□□□□□ -0.32
MKS1-204ENST00000537529 DEFB108AA8MXU0 73 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 CLDN14O95500 239 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 KRASP01116 189 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 IGHV1-46P01743 117 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 G6PCP35575 357 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 UBE2KP61086 200 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 TNFRSF9Q07011 255 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 LTC4SQ16873 150 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 DPPA3Q6W0C5 159 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 FAM222BQ8WU58 562 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 C14orf79Q96F83 325 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 NCOR1P1Q9H4R4 102 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 RAB9BQ9NP90 201 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 OR6C3Q9NZP0 311 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 ZFHX2Q9C0A1 2572 aaPredicted RBP13.04□□□□□ -0.32
MKS1-204ENST00000537529 MEX3AA1L020 520 aaKnown RBP13.04□□□□□ -0.32
MKS1-204ENST00000537529 BTBD17A6NE02 478 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 F12P00748 615 aaPredicted RBP13.04□□□□□ -0.32
MKS1-204ENST00000537529 PTAFRP25105 342 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 GPR12P47775 334 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 NPBWR1P48145 328 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 PPT1P50897 306 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 RUNX1Q01196 453 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 C22orf34Q6ZV56 151 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 ZNF561Q8N587 486 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 CLRN3Q8NCR9 226 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 SCGB1C1Q8TD33 95 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 SCNM1Q9BWG6 230 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 RBKSQ9H477 322 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.04□□□□□ -0.32
MKS1-204ENST00000537529 HSPB7Q9UBY9 170 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
MKS1-204ENST00000537529 A0A1B0GW64 132 aa13.03□□□□□ -0.32
MKS1-204ENST00000537529 MED19A0JLT2 244 aaPredicted RBP13.03□□□□□ -0.32
MKS1-204ENST00000537529 K7ENP7 123 aa13.03□□□□□ -0.32
MKS1-204ENST00000537529 F2RL2O00254 374 aa13.03□□□□□ -0.32
MKS1-204ENST00000537529 RAB29O14966 203 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms