RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TRAV6A0A075B6T7 132 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 IGHV3OR16-10A0A075B7F0 116 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 PROP1O75360 226 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 PTTG1O95997 202 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 IGLV1-47P01700 117 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 IGLV2-14P01704 120 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 ARG1P05089 322 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 NCR3LG1Q68D85 454 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 CCBE1Q6UXH8 406 aaPredicted RBP9.37□□□□□ -0.91
CDCA3-206ENST00000536241 ZNF818PQ6ZRF7 136 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 ODF3L1Q8IXM7 274 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 LINC00311Q8N616 119 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 C8orf31Q8N9H6 132 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 ZFAND1Q8TCF1 268 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 UPRTQ96BW1 309 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 C18orf12Q96KH6 178 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 SCGB3A2Q96PL1 93 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 GPHA2Q96T91 129 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 RSRP1Q9BUV0 290 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 IFI27L2Q9H2X8 130 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 COPZ2Q9P299 210 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 ZNF221Q9UK13 617 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 KCNS2Q9ULS6 477 aa9.37□□□□□ -0.91
CDCA3-206ENST00000536241 BUB1B-PAK6H3BSN5 160 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 J3QLI3 93 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 RAB29O14966 203 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 ARPC1BO15143 372 aaKnown RBP9.36□□□□□ -0.91
CDCA3-206ENST00000536241 RLN1P04808 185 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 CTSDP07339 412 aaPredicted RBP9.36□□□□□ -0.91
CDCA3-206ENST00000536241 ECI1P42126 302 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 GPR12P47775 334 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 UBE2E1P51965 193 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 RAB25P57735 213 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 OXA1LQ15070 435 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 SURF2Q15527 256 aaPredicted RBP9.36□□□□□ -0.91
CDCA3-206ENST00000536241 HLA-DRB5Q30154 266 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 TRIM16LQ309B1 348 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 PHLDA2Q53GA4 152 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 RPL39P5Q59GN2 51 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 ZNF626Q68DY1 528 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 PLET1Q6UQ28 207 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 SPNS3Q6ZMD2 512 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 TMED4Q7Z7H5 227 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 SLC38A6Q8IZM9 456 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 CENPSQ8N2Z9 138 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 DRAM1Q8N682 238 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 ZNF645Q8N7E2 425 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 ZDHHC22Q8N966 263 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 ADAD2Q8NCV1 583 aaKnown RBP9.36□□□□□ -0.91
CDCA3-206ENST00000536241 BEND2Q8NDZ0 799 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 OR10X1Q8NGY0 326 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 C5orf30Q96GV9 206 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 BEX2Q9BXY8 128 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 BEX1Q9HBH7 125 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 NUDT15Q9NV35 164 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 SDHAF2Q9NX18 166 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 PIPOXQ9P0Z9 390 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 GAB2Q9UQC2 676 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 NUBP2Q9Y5Y2 271 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 ITPR3Q14573 2671 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 CSPG4Q6UVK1 2322 aa9.36□□□□□ -0.91
CDCA3-206ENST00000536241 GPR31O00270 319 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 TNFSF12O43508 249 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 H2AFB2P0C5Z0 115 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 ANXA7P20073 488 aaKnown RBP9.35□□□□□ -0.91
CDCA3-206ENST00000536241 LINC00205P59089 165 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 KRTAP1-1Q07627 177 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 DIAPH2-AS1Q14236 149 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 LDLRAD2Q5SZI1 272 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 LHFPL4Q7Z7J7 247 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 OR4P4Q8NGL7 312 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 CHPT1Q8WUD6 406 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 AKR1E2Q96JD6 320 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 SMR3AQ99954 134 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 C20orf85Q9H1P6 137 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 GHITMQ9H3K2 345 aa9.35□□□□□ -0.91
CDCA3-206ENST00000536241 C14orf166Q9Y224 244 aaKnown RBP9.35□□□□□ -0.91
CDCA3-206ENST00000536241 SAA2-SAA4A0A096LPE2 208 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 TRAV40A0A0B4J280 105 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 ODF3BA8MYP8 253 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 INMT-MINDY4F8WBC2 141 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 LY6LH3BQJ8 138 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 CD5LO43866 347 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 PGLYRP1O75594 196 aaPredicted RBP9.34□□□□□ -0.91
CDCA3-206ENST00000536241 SLC22A5O76082 557 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 SAA2P0DJI9 122 aaPredicted RBP9.34□□□□□ -0.91
CDCA3-206ENST00000536241 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 CD99P14209 185 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 AKR1C4P17516 323 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 HTR1DP28221 377 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 LGALS4P56470 323 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 PIGPP57054 158 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 ABCA11PQ4W5N1 156 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 KLF17Q5JT82 389 aaPredicted RBP9.34□□□□□ -0.91
CDCA3-206ENST00000536241 DRAXINQ8NBI3 349 aaPredicted RBP9.34□□□□□ -0.91
CDCA3-206ENST00000536241 ZBTB34Q8NCN2 500 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 BVESQ8NE79 360 aa9.34□□□□□ -0.91
CDCA3-206ENST00000536241 FAM216AQ8WUB2 273 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms