RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 FGF11Q92914 225 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 DDIT4LQ96D03 193 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SLC25A38Q96DW6 304 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SDSLQ96GA7 329 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ZNF681Q96N22 645 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 DERL1Q9BUN8 251 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ABHD6Q9BV23 337 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 RNF126Q9BV68 326 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TMEM39BQ9GZU3 492 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SLC25A51Q9H1U9 297 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TXNIPQ9H3M7 391 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ZDHHC11Q9H8X9 412 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 MED20Q9H944 212 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 RDH14Q9HBH5 336 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 HINT3Q9NQE9 182 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 ACER3Q9NUN7 267 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SPANXCQ9NY87 97 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FLRT3Q9NZU0 649 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 MTFP1Q9UDX5 166 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FBXL17Q9UF56 701 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SS18L2Q9UHA2 77 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 CRLS1Q9UJA2 301 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 HSPB8Q9UJY1 196 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FBXW11Q9UKB1 542 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 MCTS1Q9ULC4 181 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 HSF4Q9ULV5 492 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 BOKQ9UMX3 212 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 TSSC4Q9Y5U2 329 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 RFNGQ9Y644 331 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 PHLPP1O60346 1717 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 LOC285556D6RIA3 1793 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SIP14410 1827 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 PLXNA3P51805 1871 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SCN1AP35498 2009 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 NUP205Q92621 2012 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ROBO1Q9Y6N7 1651 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 LY75O60449 1722 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ANK1P16157 1881 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 LOC102724200A0A096LPH7 203 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 BORCS7-ASMTA0A0B4J1R7 106 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PSMB11A5LHX3 300 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 A6NDN8 102 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 SLC22A20A6NK97 555 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 OR4C45A6NMZ5 311 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ANKRD30BLA7E2S9 258 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 KLLNB2CW77 178 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 M0QXV9 152 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 M0R129 80 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 M0R1X1 148 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 RAB29O14966 203 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 MLNRO43193 412 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 NPIPB7O75200 414 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ALOX12BO75342 701 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 FOXH1O75593 365 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TSHBP01222 138 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 IGHG3P01860 377 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 HLA-HP01893 362 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 HBE1P02100 147 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PFN1P07737 140 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 FAM106CPP0CH98 169 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 FUT3P21217 361 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PSMB4P28070 264 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PYCR1P32322 319 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 SRP14P37108 136 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 XCR1P46094 333 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 DNASE1L1P49184 302 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ASCL1P50553 236 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 MFAP4P55083 255 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TCTAP57738 103 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TAS2R31P59538 309 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 UBE2MP61081 183 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 LCN6P62502 163 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 GNG3P63215 75 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ARG2P78540 354 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 LCN2P80188 198 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PSG9Q00887 426 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 MEF2BQ02080 365 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 HIST1H1AQ02539 215 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 ACVR1Q04771 509 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 FOXF1Q12946 379 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ATXN7L3Q14CW9 347 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 ADIRFQ15847 76 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 PMCHL1Q16048 86 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 SLC25A35Q3KQZ1 300 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 KIAA1644Q3SXP7 199 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 LRRC37A5PQ49AS3 106 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ZNF506Q5JVG8 444 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 SPANXN4Q5MJ08 99 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 ADAMTSL4-AS1Q5T5F5 129 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 SUSD4Q5VX71 490 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 WDR25Q64LD2 544 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 ZNF322Q6U7Q0 402 aaPredicted RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 ASCL4Q6XD76 172 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 TMEM184AQ6ZMB5 413 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 FOXI2Q6ZQN5 318 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 RPS27LQ71UM5 84 aaKnown RBP2.06□□□□□ -2.08
SKA3-207ENST00000536239 MOB1BQ7L9L4 216 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 H2BFWTQ7Z2G1 175 aa2.06□□□□□ -2.08
SKA3-207ENST00000536239 CEACAM19Q7Z692 300 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms