RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 KIR2DL5BQ8NHK3 375 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 GIPC3Q8TF64 312 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 USMG5Q96IX5 58 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 ABHD14AQ9BUJ0 271 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 OR2S2Q9NQN1 319 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 RCC2Q9P258 522 aaKnown RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 MLXQ9UH92 298 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 A0A1W2PQL4 384 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-206ENST00000535290 PRKYO43930 277 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 HLA-AP01891 365 aaKnown RBP6.07□□□□□ -1.44
CLIP1-206ENST00000535290 CT45A6P0DMU7 189 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 CT45A5P0DMU8 189 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 CT45A7P0DMV0 189 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 OSMP13725 252 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 HSD17B1P14061 328 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 PPP1CCP36873 323 aaKnown RBP6.07□□□□□ -1.44
CLIP1-206ENST00000535290 ANKRD55Q3KP44 614 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 ZNF691Q5VV52 312 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 TMEM244Q5VVB8 128 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 LPCAT4Q643R3 524 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 FDX2Q6P4F2 183 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 Q6ZR54 194 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 PXT1Q8NFP0 134 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 OR4K15Q8NH41 348 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 KCNG3Q8TAE7 436 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 RNF141Q8WVD5 230 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 GHSRQ92847 366 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 MRPS24Q96EL2 167 aaKnown RBP6.07□□□□□ -1.44
CLIP1-206ENST00000535290 ATP6V1G3Q96LB4 118 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 CCDC140Q96MF4 163 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 RARRES2Q99969 163 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 IFT22Q9H7X7 185 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 UBQLN2Q9UHD9 624 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 TRAPPC2LQ9UL33 140 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 ING4Q9UNL4 249 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 ST3GAL6Q9Y274 331 aa6.07□□□□□ -1.44
CLIP1-206ENST00000535290 IGHV4-4A0A075B6R2 117 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 FAM90A23PA8MXZ1 464 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 HMGB1P1B2RPK0 211 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-206ENST00000535290 PPP5D1E7EU14 171 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 H0YJW9 148 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 M0R129 80 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 GEMIN2O14893 280 aaKnown RBP6.06□□□□□ -1.44
CLIP1-206ENST00000535290 SLC22A1O15245 554 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 SULT1C4O75897 302 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 S1PR2O95136 353 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 OR2C1O95371 312 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 APELAP0DMC3 54 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 RCC1P18754 421 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-206ENST00000535290 RPS16P62249 146 aaKnown RBP6.06□□□□□ -1.44
CLIP1-206ENST00000535290 PJVKQ0ZLH3 352 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 TMEM30BQ3MIR4 351 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 ATAD3CQ5T2N8 411 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 CYP2R1Q6VVX0 501 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 ZDHHC13Q8IUH4 622 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 UXS1Q8NBZ7 420 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 OR2G2Q8NGZ5 317 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 NEK7Q8TDX7 302 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 TNFAIP8L1Q8WVP5 186 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 CYYR1Q96J86 154 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 MRPL18Q9H0U6 180 aaKnown RBP6.06□□□□□ -1.44
CLIP1-206ENST00000535290 IFI27L2Q9H2X8 130 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 C11orf68Q9H3H3 251 aaKnown RBP6.06□□□□□ -1.44
CLIP1-206ENST00000535290 MAP6D1Q9H9H5 199 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 FGFR1OP2Q9NVK5 253 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 COA4Q9NYJ1 87 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 PRR13Q9NZ81 148 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 ZNF230Q9UIE0 474 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-206ENST00000535290 DMRT1Q9Y5R6 373 aa6.06□□□□□ -1.44
CLIP1-206ENST00000535290 IGLV2-18A0A075B6J9 118 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.05□□□□□ -1.44
CLIP1-206ENST00000535290 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 TMEM213A2RRL7 107 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 OR5H14A6NHG9 310 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 C11orf94C9JXX5 98 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 H7C2Y5 167 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 GABRPO00591 440 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 SNX3O60493 162 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 CDRT1O95170 752 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 PRH1P02810 166 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 ISG15P05161 165 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 INAFM2P0DMQ5 153 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 ATP6V1B2P21281 511 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 LGALS7P47929 136 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 RBM11P57052 281 aaKnown RBP6.05□□□□□ -1.44
CLIP1-206ENST00000535290 NANOS3P60323 173 aaKnown RBP6.05□□□□□ -1.44
CLIP1-206ENST00000535290 RHOGP84095 191 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 RIPK1Q13546 671 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 EXOSC2Q13868 293 aaKnown RBP6.05□□□□□ -1.44
CLIP1-206ENST00000535290 RSU1Q15404 277 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 TP53I3Q53FA7 332 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 RPL39P5Q59GN2 51 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 C6orf183Q5T699 404 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 AADACL4Q5VUY2 407 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 ASCL4Q6XD76 172 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 HS3ST5Q8IZT8 346 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 OR5AN1Q8NGI8 311 aa6.05□□□□□ -1.44
CLIP1-206ENST00000535290 OR1L6Q8NGR2 347 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms