RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 DIRAS2Q96HU8 199 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 LYSMD1Q96S90 227 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 HIST1H2BLQ99880 126 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ADAT1Q9BUB4 502 aaKnown RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 LRRC61Q9BV99 259 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TM2D1Q9BX74 207 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM59Q9BXS4 323 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OCR1Q9BZK8 76 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SELENOIQ9C0D9 397 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ZBP1Q9H171 429 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 PPDPFQ9H3Y8 114 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 MMP26Q9NRE1 261 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 HEBP1Q9NRV9 189 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 UQCC1Q9NVA1 299 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ATAD5Q96QE3 1844 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 A0A0D9SFI3 127 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 LOC100130705A0A1B0GUX0 176 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 FOXI3A8MTJ6 420 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 UTS2O95399 124 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SEMA4FO95754 770 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 AIFM1O95831 613 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SMIM17P0DL12 118 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 CXCL3P19876 107 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR10J1P30954 320 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 ELK3P41970 407 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 PRLHRP49683 370 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 MAD2L1BPQ15013 274 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 C17orf58Q2M2W7 97 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 CEACAM21Q3KPI0 293 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 FAHD1Q6P587 224 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 HEPN1Q6WQI6 88 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF497Q6ZNH5 498 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OLIG3Q7RTU3 272 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 CMC1Q7Z7K0 106 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF485Q8NCK3 441 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 MDS2Q8NDY4 140 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SLC26A10Q8NG04 563 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR6N1Q8NGY5 312 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR5K2Q8NHB8 316 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 NDRG1Q92597 394 aaKnown RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 POP5Q969H6 163 aaKnown RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 PIK3IP1Q96FE7 263 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 PYURFQ96I23 114 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 C9orf85Q96MD7 179 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 TBX15Q96SF7 602 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 MICU1Q9BPX6 476 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 GFRA4Q9GZZ7 299 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SLC25A31Q9H0C2 315 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 ARL6Q9H0F7 186 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 HRASLS2Q9NWW9 162 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 MARCH5Q9NX47 278 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 MRPL27Q9P0M9 148 aaKnown RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 UFC1Q9Y3C8 167 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 GVINP1Q7Z2Y8 2422 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 LAMA4Q16363 1823 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 IGLV4-3A0A075B6K6 122 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 A0A0D9SG52 128 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 BBIP1A8MTZ0 92 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF705GA8MUZ8 300 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SULT2B1O00204 365 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 MFNGO00587 321 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SOCS3O14543 225 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 GALR3O60755 368 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 MPDU1O75352 247 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 GAS8-AS1O95177 125 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OXTP01178 125 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SERPINA7P05543 415 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SOD3P08294 240 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR5G3P0C626 314 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 ESDP10768 282 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 BCL3P20749 454 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 IMPA1P29218 277 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 CMPK1P30085 196 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 TGFBR1P36897 503 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR1D4P47884 311 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 CTBP2P56545 445 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 CDK5Q00535 292 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 GNMTQ14749 295 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 PRSS8Q16651 343 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 C14orf177Q52M58 125 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 LAIR2Q6ISS4 152 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 PRSS54Q6PEW0 395 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 REG3GQ6UW15 175 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM183AQ8IXX5 376 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM251Q8N6I4 163 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR52L1Q8NGH7 329 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR5A2Q8NGI9 324 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SLC35G5Q96KT7 338 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 ATF6BQ99941 703 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SOSTQ9BQB4 213 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 C20orf27Q9GZN8 174 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 CWH43Q9H720 699 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR5AC2Q9NZP5 309 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 SS18L2Q9UHA2 77 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 NAT8Q9UHE5 227 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 VAX2Q9UIW0 290 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 PSG8Q9UQ74 426 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 C14orf166Q9Y224 244 aaKnown RBP2.77□□□□□ -1.97
CSMD3-210ENST00000534172 OR51B2Q9Y5P1 312 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms