RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 GZMHP20718 246 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 GABRA2P47869 451 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 TNFRSF9Q07011 255 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 KRBOX4Q5JUW0 171 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 TIMM23BQ5SRD1 257 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 CENPVQ7Z7K6 275 aaPredicted RBP10.04□□□□□ -0.8
ATM-222ENST00000533733 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 C14orf79Q96F83 325 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 MRPL37Q9BZE1 423 aaKnown RBP10.04□□□□□ -0.8
ATM-222ENST00000533733 OR2D2Q9H210 308 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 PARD6AQ9NPB6 346 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 SLC25A15Q9Y619 301 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 CFAP54Q96N23 3096 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 SPAARA0A1B0GVQ0 90 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 CXorf65A6NEN9 183 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 SRP19P09132 144 aaKnown RBP10.04□□□□□ -0.8
ATM-222ENST00000533733 RPS23P62266 143 aaKnown RBP10.04□□□□□ -0.8
ATM-222ENST00000533733 DEFB109BQ30KR1 87 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 LINC00518Q8N0U6 118 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 OR1L1Q8NH94 360 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 CLDND2Q8NHS1 167 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 HIST1H2BAQ96A08 127 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 COQ2Q96H96 371 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 COL25A1Q9BXS0 654 aaPredicted RBP10.04□□□□□ -0.8
ATM-222ENST00000533733 SIRT7Q9NRC8 400 aa10.04□□□□□ -0.8
ATM-222ENST00000533733 INTS1Q8N201 2190 aaKnown RBP10.03□□□□□ -0.8
ATM-222ENST00000533733 LRRC30A6NM36 301 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 SRRM5B3KS81 715 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 ITGB1BP1O14713 200 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 GPR37O15354 613 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 AGFG2O95081 481 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 IGHV3-13P01766 116 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 CRYABP02511 175 aaKnown RBP10.03□□□□□ -0.8
ATM-222ENST00000533733 COL10A1Q03692 680 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 AESQ08117 197 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 TMEM267Q0VDI3 215 aaPredicted RBP10.03□□□□□ -0.8
ATM-222ENST00000533733 PNRC1Q12796 327 aaPredicted RBP10.03□□□□□ -0.8
ATM-222ENST00000533733 CR1LQ2VPA4 569 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 TMEM41BQ5BJD5 291 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 SLC35E3Q7Z769 313 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 ZNF610Q8N9Z0 462 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 SNX22Q96L94 193 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 CLCC1Q96S66 551 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 WDR61Q9GZS3 305 aaKnown RBP10.03□□□□□ -0.8
ATM-222ENST00000533733 SAV1Q9H4B6 383 aaPredicted RBP10.03□□□□□ -0.8
ATM-222ENST00000533733 CISD1Q9NZ45 108 aaKnown RBP10.03□□□□□ -0.8
ATM-222ENST00000533733 DKK4Q9UBT3 224 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 JPT1Q9UK76 154 aa10.03□□□□□ -0.8
ATM-222ENST00000533733 HEATR1Q9H583 2144 aaKnown RBP10.03□□□□□ -0.8
ATM-222ENST00000533733 LOC102723971A0A1B0GUV8 181 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 MGST3O14880 152 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 CLDN1O95832 211 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 OR13C7P0DN81 318 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 TIMP3P35625 211 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 GLRXP35754 106 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 FABP6P51161 128 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 RUNX1Q01196 453 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 SLC38A11Q08AI6 406 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 ICAM4Q14773 271 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 Q6ZR03 302 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 C1QL4Q86Z23 238 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 LRRC29Q8WV35 223 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 TVP23CQ96ET8 276 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 NIPSNAP3BQ9BS92 247 aa10.02□□□□□ -0.8
ATM-222ENST00000533733 GTF3C1Q12789 2109 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 TRAV39A0A0B4J263 110 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 H3BP45 60 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 RBFOX2O43251 390 aaKnown RBP eCLIP10.02□□□□□ -0.81
ATM-222ENST00000533733 NXPH3O95157 252 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 METTL15P1P0C7V9 234 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 IAPPP10997 89 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 PRDX2P32119 198 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 KIR2DS2P43631 304 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 FOXF2Q12947 444 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 RTP5Q14D33 572 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 PRAMEF6Q5VXH4 476 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 Q6ZS92 163 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 ZNF826PQ6ZT77 177 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 SSX8Q7RTT4 187 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 TAF15Q92804 592 aaKnown RBP eCLIP10.02□□□□□ -0.81
ATM-222ENST00000533733 TMEM147Q9BVK8 224 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 RBKSQ9H477 322 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 GAB2Q9UQC2 676 aa10.02□□□□□ -0.81
ATM-222ENST00000533733 WNT9BO14905 357 aa10.01□□□□□ -0.81
ATM-222ENST00000533733 YPEL1O60688 119 aa10.01□□□□□ -0.81
ATM-222ENST00000533733 ZNF737O75373 536 aa10.01□□□□□ -0.81
ATM-222ENST00000533733 CRYAAP02489 173 aa10.01□□□□□ -0.81
ATM-222ENST00000533733 WT1P19544 449 aaPredicted RBP10.01□□□□□ -0.81
ATM-222ENST00000533733 SPINK2P20155 84 aa10.01□□□□□ -0.81
ATM-222ENST00000533733 AGAP20933 346 aa10.01□□□□□ -0.81
ATM-222ENST00000533733 CEBPDP49716 269 aaPredicted RBP10.01□□□□□ -0.81
ATM-222ENST00000533733 RPP30P78346 268 aaKnown RBP10.01□□□□□ -0.81
ATM-222ENST00000533733 CCL20P78556 96 aa10.01□□□□□ -0.81
ATM-222ENST00000533733 AARDQ4LEZ3 155 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms