RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NTN1O95631 604 aa9.71□□□□□ -0.85
AMBRA1-211ENST00000533727 CELA3AP09093 270 aa9.71□□□□□ -0.85
AMBRA1-211ENST00000533727 SCGB1C2P0DMR2 95 aa9.71□□□□□ -0.85
AMBRA1-211ENST00000533727 PPIAL4GP0DN37 164 aa9.71□□□□□ -0.85
AMBRA1-211ENST00000533727 RNFT1Q5M7Z0 435 aa9.71□□□□□ -0.85
AMBRA1-211ENST00000533727 DPPA3Q6W0C5 159 aa9.71□□□□□ -0.85
AMBRA1-211ENST00000533727 OR10C1Q96KK4 312 aa9.71□□□□□ -0.85
AMBRA1-211ENST00000533727 LHX2P50458 406 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 B2MP61769 119 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 PAX5Q02548 391 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 LRP11Q86VZ4 500 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 OR1L8Q8NGR8 309 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 DYNLRB2Q8TF09 96 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 RALYQ9UKM9 306 aaKnown RBP9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 ZNF205O95201 554 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 HTR1DP28221 377 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 CLDN18P56856 261 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 ELOBQ15370 118 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 C20orf204Q6ZNR8 217 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 PRSS33Q8NF86 280 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 BCL2L2Q92843 193 aaPredicted RBP9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 STARD4Q96DR4 205 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 ABHD14AQ9BUJ0 271 aa9.71□□□□□ -0.86
AMBRA1-211ENST00000533727 ZNF729A6NN14 1252 aaPredicted RBP9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 SYNGR1O43759 233 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 NEURL1O76050 574 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 SPCS3P61009 180 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 DHRS11Q6UWP2 260 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 C9orf106Q8NAJ2 232 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 LHFPL6Q9Y693 200 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 CACNA1EQ15878 2313 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 SIP14410 1827 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 FAM24AA6NFZ4 105 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 GNG7O60262 68 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 ADAP1O75689 374 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 PTGDSP41222 190 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 SUCLG1P53597 346 aaKnown RBP9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 DLK1P80370 383 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 Q1RN00 199 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 CBLN4Q9NTU7 201 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 CNOT1A5YKK6 2376 aaKnown RBP9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 TGFBR3LH3BV60 316 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 COMPP49747 757 aaPredicted RBP9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 FAM3AP98173 230 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 ETV3LQ6ZN32 361 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 BMPERQ8N8U9 685 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 OR5AU1Q8NGC0 362 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 RAB24Q969Q5 203 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 ADAT3Q96EY9 351 aaPredicted RBP9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 TMEM191AQ9H0A3 160 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 COX19Q49B96 90 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 FFAR4Q5NUL3 377 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 DHRS7BQ6IAN0 325 aaPredicted RBP9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 Q6ZS92 163 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 SNRNP40Q96DI7 357 aaKnown RBP9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 GPA33Q99795 319 aa9.7□□□□□ -0.86
AMBRA1-211ENST00000533727 SPINK4O60575 86 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 ZNF253O75346 499 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 CECR9P0C854 216 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 PARP11Q9NR21 331 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 SLC2A8Q9NY64 477 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 FAM74A7A6NL05 159 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 PPYP01298 95 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 PRSS12P56730 875 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 AESQ08117 197 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 ZNF345Q14585 488 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 IRF3Q14653 427 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 FAM74A3Q4VXF1 159 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 LYRM7Q5U5X0 104 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 PUSL1Q8N0Z8 303 aaKnown RBP9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 Q8WTZ3 238 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 ATP5SQ99766 215 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 NRIP2Q9BQI9 281 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 IDI2-AS1Q9NZ38 188 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 SLC45A2Q9UMX9 530 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 LSM2Q9Y333 95 aaKnown RBP9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 H3BQ15 152 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 SEMG1P04279 462 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 OR5AL1P0C617 328 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 BSPH1Q075Z2 132 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 ZNF788Q6ZQV5 615 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 CALHM1Q8IU99 346 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 OR10AC1Q8NH08 325 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 OR9G1Q8NH87 305 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 CHAC2Q8WUX2 184 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 ANAPC16Q96DE5 110 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 CACNG5Q9UF02 275 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 ZNF835Q9Y2P0 537 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 PAM16Q9Y3D7 125 aa9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 NUP214P35658 2090 aaPredicted RBP9.69□□□□□ -0.86
AMBRA1-211ENST00000533727 VSIG8P0DPA2 414 aa9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 SLC38A11Q08AI6 406 aa9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 KLF9Q13886 244 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 GUCA2BQ16661 112 aa9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 FAM90A1Q86YD7 464 aa9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 TMEM106BQ9NUM4 274 aa9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 CD99P14209 185 aa9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 DDTP30046 118 aa9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 KIR3DL2P43630 455 aa9.68□□□□□ -0.86
AMBRA1-211ENST00000533727 MYPOPQ86VE0 399 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms