RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 DFFBO76075 338 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 KRASP01116 189 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 FBP1P09467 338 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 IGHV3-43DP0DP04 118 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 KRBOX4Q5JUW0 171 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 AKR1C8PQ5T2L2 129 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 IGF2-ASQ6U949 168 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 BTNL3Q6UXE8 466 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 RFESDQ8TAC1 157 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 VSIRQ9H7M9 311 aa12.83□□□□□ -0.35
CACNA1E-208ENST00000533229 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 G6PCP35575 357 aa12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF816Q0VGE8 651 aaPredicted RBP12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 P2RY6Q15077 328 aa12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 SPRNQ5BIV9 151 aa12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF525Q8N782 197 aa12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 HIST1H2BAQ96A08 127 aa12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 EGLN1Q9GZT9 426 aa12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 KIAA1456Q9P272 454 aa12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 MMP24Q9Y5R2 645 aa12.83□□□□□ -0.36
CACNA1E-208ENST00000533229 A0A1B0GWJ7 208 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 C17orf98A8MV24 154 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 DEFB108AA8MXU0 73 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 IFNA5P01569 189 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 EGR1P18146 543 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 TUBG1P23258 451 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 MEOX2P50222 304 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 UBE2KP61086 200 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 SPANXN5Q5MJ07 72 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 ZADH2Q8N4Q0 377 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 C15orf54Q8N8G6 183 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 OR2Z1Q8NG97 314 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 LRRC29Q8WV35 223 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 TOLLIPQ9H0E2 274 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 TUBG2Q9NRH3 451 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 SMG1Q96Q15 3661 aaKnown RBP12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF891A8MT65 544 aaPredicted RBP12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 RNF212BA8MTL3 300 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 EIF3GO75821 320 aaKnown RBP eCLIP12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 P0C879 139 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 PAX6P26367 422 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 B2MP61769 119 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 SOHLH1Q5JUK2 328 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 SLC25A24Q6NUK1 477 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 KDF1Q8NAX2 398 aaPredicted RBP12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 RPRMQ9NS64 109 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 DUSP13Q9UII6 198 aa12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 PUS1Q9Y606 427 aaKnown RBP eCLIP12.82□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF318Q5VUA4 2279 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 BTBD17A6NE02 478 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 IFNL4K9M1U5 179 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 TM4SF5O14894 197 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 S1PR2O95136 353 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 ARG1P05089 322 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 SRP19P09132 144 aaKnown RBP12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 ICAM4Q14773 271 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 SMIM21Q3B7S5 101 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 ZBTB34Q8NCN2 500 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 CLDND2Q8NHS1 167 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 NINJ1Q92982 152 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 AGMATQ9BSE5 352 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 HIPK2Q9H2X6 1198 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 SMDT1Q9H4I9 107 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 FAM215AQ9Y5M1 114 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF292O60281 2723 aa12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 INTS1Q8N201 2190 aaKnown RBP12.81□□□□□ -0.36
CACNA1E-208ENST00000533229 LINC00473A8K010 186 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 K7EM74 188 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 ATXN7O15265 892 aaPredicted RBP12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 PRDX2P32119 198 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 PLA2G5P39877 138 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF83P51522 516 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 SNRPEP62304 92 aaKnown RBP12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 TLE4Q04727 773 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 TNFRSF9Q07011 255 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF726P1Q15940 193 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 BEND4Q6ZU67 534 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 RBKSQ9H477 322 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 SVILO95425 2214 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 IGKV1D-17A0A075B6S4 117 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 A0A1W2PPE2 198 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 ODAMA1E959 279 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 C15orf65H3BRN8 121 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 ST8SIA5O15466 376 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 ZNF737O75373 536 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 SCAF4O95104 1147 aaKnown RBP12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 FOLR2P14207 255 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 CEBPGP53567 150 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 EDDM3AQ14507 147 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 LRRC75BQ2VPJ9 315 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 SSX7Q7RTT5 188 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 S100PBPQ96BU1 408 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 PLPPR2Q96GM1 343 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 OR4C12Q96R67 309 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 TUBA4BQ9H853 241 aa12.8□□□□□ -0.36
CACNA1E-208ENST00000533229 HSPB7Q9UBY9 170 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms