RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, human

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF3A-215	ENST00000533145	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.49	□□□□□ -0.57
HIF3A-215	ENST00000533145	IFI27L2	Q9H2X8	130 aa		11.49	□□□□□ -0.57
HIF3A-215	ENST00000533145	C5orf66	Q9H5L9	145 aa		11.49	□□□□□ -0.57
HIF3A-215	ENST00000533145	PIPOX	Q9P0Z9	390 aa		11.49	□□□□□ -0.57
HIF3A-215	ENST00000533145	ITGB1BP2	Q9UKP3	347 aa		11.49	□□□□□ -0.57
HIF3A-215	ENST00000533145	RBM7	Q9Y580	266 aa	Known RBP	11.49	□□□□□ -0.57
HIF3A-215	ENST00000533145	CSMD1	Q96PZ7	3565 aa		11.49	□□□□□ -0.57
HIF3A-215	ENST00000533145	VPS13C	Q709C8	3753 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	GPR31	O00270	319 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	RAB29	O14966	203 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	ST8SIA5	O15466	376 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	H2AFB2	P0C5Z0	115 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	PGAM2	P15259	253 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	HOXB4	P17483	251 aa	Predicted RBP	11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	UBE2E1	P51965	193 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	ZNF137P	P52743	207 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	DHODH	Q02127	395 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	TRIM16L	Q309B1	348 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	ZNF626	Q68DY1	528 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	CENPS	Q8N2Z9	138 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	TOMM40L	Q969M1	308 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	FAHD2A	Q96GK7	314 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	C20orf85	Q9H1P6	137 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	MMP28	Q9H239	520 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	SIRT7	Q9NRC8	400 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	CCL28	Q9NRJ3	127 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	NUDT15	Q9NV35	164 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	FLVCR2	Q9UPI3	526 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	AUP1	Q9Y679	476 aa		11.48	□□□□□ -0.57
HIF3A-215	ENST00000533145	ODF3B	A8MYP8	253 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	RNASEK-C17orf49	H0YIS7	233 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	TOR1A	O14656	332 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	PROP1	O75360	226 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	IGHV3-7	P01780	117 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	UBE2M	P61081	183 aa	Known RBP	11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	HLA-DRB5	Q30154	266 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	FAM71F2	Q6NXP2	309 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	SPNS3	Q6ZMD2	512 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	ZNF818P	Q6ZRF7	136 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	SLC25A42	Q86VD7	318 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	PNKD	Q8N490	385 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	DRAM1	Q8N682	238 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	ST6GALNAC6	Q969X2	333 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	ABHD14B	Q96IU4	210 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	ZNF251	Q9BRH9	671 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	PCGF1	Q9BSM1	259 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	OR2D2	Q9H210	308 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	C7orf69	Q9H7B7	122 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	ZNF221	Q9UK13	617 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	RNF150	Q9ULK6	438 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	C14orf166	Q9Y224	244 aa	Known RBP	11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	CCDC168	Q8NDH2	2452 aa		11.47	□□□□□ -0.57
HIF3A-215	ENST00000533145	ABCA1	O95477	2261 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	TRAV6	A0A075B6T7	132 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145		A0A1W2PPE3	182 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	INMT-MINDY4	F8WBC2	141 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	LY6L	H3BQJ8	138 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	BUB1B-PAK6	H3BSN5	160 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	ARPC1B	O15143	372 aa	Known RBP	11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	PEX14	O75381	377 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	IL5	P05113	134 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	GPR12	P47775	334 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	GNG10	P50151	68 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	DLX1	P56177	255 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	TAS2R31	P59538	309 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	BAMBI	Q13145	260 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	TMEM128	Q5BJH2	165 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	CMTM1	Q8IZ96	169 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	OR4P4	Q8NGL7	312 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	TMEM230	Q96A57	120 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	SLC2A9	Q9NRM0	540 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	SDHAF2	Q9NX18	166 aa		11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.46	□□□□□ -0.57
HIF3A-215	ENST00000533145	ITPR3	Q14573	2671 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	CENPVL3	A0A0U1RRI6	287 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	HSD17B6	O14756	317 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	PGLYRP1	O75594	196 aa	Predicted RBP	11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	DHFR	P00374	187 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	RLN1	P04808	185 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	COX7A1	P24310	79 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	IL3RA	P26951	378 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	S100G	P29377	79 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	KLRD1	Q13241	179 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	MINOS1	Q5TGZ0	78 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	ZNF66	Q6ZN08	573 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145		Q6ZNX1	250 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	ZNF833P	Q6ZTB9	187 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	KCTD9	Q7L273	389 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	LYG1	Q8N1E2	194 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	CCDC71L	Q8N9Z2	235 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	OR10X1	Q8NGY0	326 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	LHX4	Q969G2	390 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	C5orf30	Q96GV9	206 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	S1PR3	Q99500	378 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	TBL2	Q9Y4P3	447 aa	Known RBP	11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	MINOS1-NBL1	R4GNA1	71 aa		11.45	□□□□□ -0.58
HIF3A-215	ENST00000533145	SAA2-SAA4	A0A096LPE2	208 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms