RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	LINC01561	Q8N1V8	128 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	SYS1	Q8N2H4	156 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	OR9Q2	Q8NGE9	314 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	OR4X2	Q8NGF9	303 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	RPS4Y2	Q8TD47	263 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	DUS3L	Q96G46	650 aa	Known RBP	4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	RBP7	Q96R05	134 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	ATP5S	Q99766	215 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	PRSS27	Q9BQR3	290 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	OSBPL10	Q9BXB5	764 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	MAP1LC3C	Q9BXW4	147 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	NDUFAF1	Q9Y375	327 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	NOP16	Q9Y3C1	178 aa	Known RBP	4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	KMT2A	Q03164	3969 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	IGHV3OR15-7	A0A075B7D8	119 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	PRORSD1P	A6NEY8	169 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	TMEM210	A6NLX4	147 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	COPE	O14579	308 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	XRCC2	O43543	280 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	OR7A10	O76100	309 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	VHL	P40337	213 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	GUCA1A	P43080	201 aa	Predicted RBP	4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	YAP1	P46937	504 aa	Known RBP	4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	UBE2G2	P60604	165 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	NCALD	P61601	193 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	LSM6	P62312	80 aa	Known RBP	4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	OR8G1	Q15617	311 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	TRIM16L	Q309B1	348 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	C5orf47	Q569G3	176 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	LRRC10	Q5BKY1	277 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	LDLRAD2	Q5SZI1	272 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	C9orf66	Q5T8R8	295 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	SLC25A48	Q6ZT89	311 aa	Known RBP	4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	DCXR	Q7Z4W1	244 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	MKX	Q8IYA7	352 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	OSR2	Q8N2R0	312 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	TPRX1	Q8N7U7	411 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	ZNF114	Q8NC26	417 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	NECAP1	Q8NC96	275 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	SLC26A10	Q8NG04	563 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	OR5K1	Q8NHB7	308 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	ISOC2	Q96AB3	205 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	MALSU1	Q96EH3	234 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	RNF2	Q99496	336 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	MCHR1	Q99705	422 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	C7orf50	Q9BRJ6	194 aa	Known RBP	4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	HCAR1	Q9BXC0	346 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	SRR	Q9GZT4	340 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	CLEC5A	Q9NY25	188 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	VNN3	Q9NY84	501 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	MUC4	Q99102	2169 aa		4.37	□□□□□ -1.71
PUM1-222	ENST00000531867	IGLV1-36	A0A0B4J1U3	117 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867		A0A1B0GW15	77 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	TRAPPC13	A5PLN9	417 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	ODF3B	A8MYP8	253 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	GOSR2	O14653	212 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	RER1	O15258	196 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	TSPAN13	O95857	204 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	IL6	P05231	212 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	FRMD6-AS1	P0C7T7	363 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	FGF9	P31371	208 aa	Predicted RBP	4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	GSK3B	P49841	420 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	ZNF85	Q03923	595 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	TMEM187	Q14656	261 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	DGUOK	Q16854	277 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	SAPCD1	Q5SSQ6	148 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	WDR82	Q6UXN9	313 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	OR2W3	Q7Z3T1	314 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	OR5T1	Q8NG75	326 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	OR6T1	Q8NGN1	323 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	OR9Q1	Q8NGQ5	310 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	OR6N2	Q8NGY6	317 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	CAPSL	Q8WWF8	208 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	SEH1L	Q96EE3	360 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	C2orf48	Q96LS8	159 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	GAFA1	Q96PS6	74 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	ZNF649	Q9BS31	505 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	TLNRD1	Q9H1K6	362 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	OR51M1	Q9H341	326 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	HEXA-AS1	Q9H8Q6	139 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	PLEKHA3	Q9HB20	300 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	ZFP57	Q9NU63	452 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	AIG1	Q9NVV5	245 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	KLK11	Q9UBX7	282 aa		4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	TBL2	Q9Y4P3	447 aa	Known RBP	4.36	□□□□□ -1.71
PUM1-222	ENST00000531867	ABCA13	Q86UQ4	5058 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867		A0A1B0GTI1	187 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	TMEM213	A2RRL7	107 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	PRSS37	A4D1T9	235 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867		A6NIZ1	184 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	CD300LB	A8K4G0	201 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	C5orf58	C9J3I9	102 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867		H3BMQ9	156 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	KPNA4	O00629	521 aa	Predicted RBP	4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	IGKV3-20	P01619	116 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	ACSM4	P0C7M7	580 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	CTLA4	P16410	223 aa		4.35	□□□□□ -1.71
PUM1-222	ENST00000531867	FCGR2C	P31995	323 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms