RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZNF184Q99676 751 aaPredicted RBP6.85□□□□□ -1.31
USF1-210ENST00000531842 FAM103A1Q9BTL3 118 aaKnown RBP6.85□□□□□ -1.31
USF1-210ENST00000531842 DUSP21Q9H596 190 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 PLEKHA3Q9HB20 300 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 KCNIP1Q9NZI2 227 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 GAB2Q9UQC2 676 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 FCN1O00602 326 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 SC5DO75845 299 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 HBZP02008 142 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 CD1AP06126 327 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 OR8U9P0C7N5 309 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 EGR2P11161 476 aaPredicted RBP6.84□□□□□ -1.31
USF1-210ENST00000531842 CELP19835 753 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 WNT4P56705 351 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 ACTBP60709 375 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 LSAMPQ13449 338 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 MED21Q13503 144 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 GNMTQ14749 295 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 Q499Y3 187 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 C19orf54Q5BKX5 351 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 GLIPR1L1Q6UWM5 242 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 SLC25A48Q6ZT89 311 aaKnown RBP6.84□□□□□ -1.31
USF1-210ENST00000531842 MINDY2Q8NBR6 621 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 OR1L1Q8NH94 360 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 MUL1Q969V5 352 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 ZNF251Q9BRH9 671 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 MRPL20Q9BYC9 149 aaKnown RBP6.84□□□□□ -1.31
USF1-210ENST00000531842 HIPK2Q9H2X6 1198 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 OR2S2Q9NQN1 319 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 MRPS28Q9Y2Q9 187 aaKnown RBP6.84□□□□□ -1.31
USF1-210ENST00000531842 PEX16Q9Y5Y5 336 aa6.84□□□□□ -1.31
USF1-210ENST00000531842 IRGMA1A4Y4 181 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 UBE2QL1A1L167 161 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 ANKRD34BA5PLL1 514 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 A8MZ25 164 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 PTGES3LE9PB15 166 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 HSPA12AO43301 675 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 DEDDO75618 318 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 CRTAPO75718 401 aaPredicted RBP6.83□□□□□ -1.32
USF1-210ENST00000531842 CD37P11049 281 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 CRHBPP24387 322 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 OR3A3P47888 321 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 EWSR1Q01844 656 aaKnown RBP eCLIP6.83□□□□□ -1.32
USF1-210ENST00000531842 PMS2P11Q13670 270 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 TMEM30BQ3MIR4 351 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 Q3ZCU0 254 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 YIF1BQ5BJH7 314 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 AWAT2Q6E213 333 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 TRAT1Q6PIZ9 186 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 IZUMO2Q6UXV1 221 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 IL34Q6ZMJ4 242 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 ANKRD13BQ86YJ7 626 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 CLCC1Q96S66 551 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 GFI1Q99684 422 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 THAP7Q9BT49 309 aaPredicted RBP6.83□□□□□ -1.32
USF1-210ENST00000531842 SELENOIQ9C0D9 397 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 GHITMQ9H3K2 345 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 FBXL15Q9H469 300 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 BANF2Q9H503 90 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 TUBA4BQ9H853 241 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 TAF9BQ9HBM6 251 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 ERGIC3Q9Y282 383 aa6.83□□□□□ -1.32
USF1-210ENST00000531842 LANCL1O43813 399 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 ATP6V1G2O95670 118 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 TRBV12-3P01733 135 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 HLA-DRB1P01911 266 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 MAS1P04201 325 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 IFNA6P05013 189 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 RCC1P18754 421 aaPredicted RBP6.82□□□□□ -1.32
USF1-210ENST00000531842 EDN2P20800 178 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 FUT3P21217 361 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 MAP2K4P45985 399 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 DYRK1AQ13627 763 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 C5orf64Q2M2E5 130 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 STEAP3Q658P3 488 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 SIGIRRQ6IA17 410 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 GLDNQ6ZMI3 551 aaPredicted RBP6.82□□□□□ -1.32
USF1-210ENST00000531842 TMEM91Q6ZNR0 172 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 LRRTM1Q86UE6 522 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 ODF3L1Q8IXM7 274 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 OR52L2PQ8NGH6 319 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 ABHD5Q8WTS1 349 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 MRPS24Q96EL2 167 aaKnown RBP6.82□□□□□ -1.32
USF1-210ENST00000531842 CHCHD6Q9BRQ6 235 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 STUB1Q9UNE7 303 aa6.82□□□□□ -1.32
USF1-210ENST00000531842 NBR2O15453 112 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 CA11O75493 328 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 RGS11O94810 467 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 HSPB1P04792 205 aaKnown RBP6.81□□□□□ -1.32
USF1-210ENST00000531842 MGMTP16455 207 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 PPP1CCP36873 323 aaKnown RBP6.81□□□□□ -1.32
USF1-210ENST00000531842 ZNF137PP52743 207 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 TPPP2P59282 170 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 CX3CL1P78423 397 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 PLGLAQ15195 96 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 SPHARQ15513 63 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 LIN54Q6MZP7 749 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 DEFB125Q8N687 156 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 OR2AK2Q8NG84 335 aa6.81□□□□□ -1.32
USF1-210ENST00000531842 FAM46BQ96A09 425 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms