RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 GNG10P50151 68 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 RPL15P61313 204 aaKnown RBP11.66□□□□□ -0.54
CPSF1-206ENST00000531480 ZNF816Q0VGE8 651 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-206ENST00000531480 MADCAM1Q13477 382 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 HABP2Q14520 560 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-206ENST00000531480 LRRC75BQ2VPJ9 315 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 HOGA1Q86XE5 327 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 ODF3L1Q8IXM7 274 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 IZUMO1Q8IYV9 350 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 FAM216AQ8WUB2 273 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 IFT46Q9NQC8 304 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 A0A1W2PPE3 182 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 A0A1W2PPI3 338 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 FAM90A9PA6NNJ1 464 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 TRIM77I1YAP6 450 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 PTTG1O95997 202 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 PTHLHP12272 177 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 NAT1P18440 290 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 TBPP20226 339 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 PAX6P26367 422 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 DYRK1AQ13627 763 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 ZNF79Q15937 498 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 ACTBL2Q562R1 376 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 IGSF11Q5DX21 431 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 POC5Q8NA72 575 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 OR10X1Q8NGY0 326 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 SPATA3Q8NHX4 192 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 GPX8Q8TED1 209 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 IL1F10Q8WWZ1 152 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 MAFIPQ8WZ33 124 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 ABHD1Q96SE0 405 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 SSX3Q99909 188 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 ABHD14AQ9BUJ0 271 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 IFI27L2Q9H2X8 130 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 GHITMQ9H3K2 345 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 OR1A1Q9P1Q5 309 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 COPZ2Q9P299 210 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 ANXA10Q9UJ72 324 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 VPREB3Q9UKI3 123 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 HILPDAQ9Y5L2 63 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
CPSF1-206ENST00000531480 CTXN2P0C2S0 81 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 CEACAM6P40199 344 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 RAB7AP51149 207 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 TAS2R19P59542 299 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 DIAPH2-AS1Q14236 149 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 TRIM16LQ309B1 348 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 KRTAP24-1Q3LI83 254 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 CCDC144NLQ6NUI1 221 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 FAM71F2Q6NXP2 309 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 OR8H3Q8N146 312 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 EDARADDQ8WWZ3 215 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 CFHR4Q92496 578 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 SNAPC3Q92966 411 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 ST6GALNAC5Q9BVH7 336 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 CHIAQ9BZP6 476 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 PARP12Q9H0J9 701 aaKnown RBP11.64□□□□□ -0.55
CPSF1-206ENST00000531480 MTFP1Q9UDX5 166 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 SLC23A1Q9UHI7 598 aa11.64□□□□□ -0.55
CPSF1-206ENST00000531480 H3BUX3 64 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 HSD17B6O14756 317 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 LANCL1O43813 399 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 IL3RAP26951 378 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 ASAH1Q13510 395 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 MEF2DQ14814 521 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 THNSL2Q86YJ6 484 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 LYSMD2Q8IV50 215 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 H1FOOQ8IZA3 346 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-206ENST00000531480 GVQW1Q8N7I0 195 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 DTX3Q8N9I9 347 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 BEST4Q8NFU0 473 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 OR2AK2Q8NG84 335 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 OR10J5Q8NHC4 309 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 RTN4IP1Q8WWV3 396 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-206ENST00000531480 TOMM40LQ969M1 308 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 RPEQ96AT9 228 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 ZNF251Q9BRH9 671 aa11.63□□□□□ -0.55
CPSF1-206ENST00000531480 C11orf54Q9H0W9 315 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-206ENST00000531480 A6NDX4 124 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 HSPA12AO43301 675 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 TXNL1O43396 289 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 GAPDHP04406 335 aaKnown RBP11.62□□□□□ -0.55
CPSF1-206ENST00000531480 IFNA6P05013 189 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 EBI3Q14213 229 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 CCBE1Q6UXH8 406 aaPredicted RBP11.62□□□□□ -0.55
CPSF1-206ENST00000531480 TMEM17Q86X19 198 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 TMEM229BQ8NBD8 167 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 ENKURQ8TC29 256 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 TMEM158Q8WZ71 300 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 GCDHQ92947 438 aaPredicted RBP11.62□□□□□ -0.55
CPSF1-206ENST00000531480 DUX5Q96PT3 197 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 RDH8Q9NYR8 311 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 GAB2Q9UQC2 676 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 TCF19Q9Y242 345 aa11.62□□□□□ -0.55
CPSF1-206ENST00000531480 RBMX2Q9Y388 322 aaKnown RBP11.62□□□□□ -0.55
CPSF1-206ENST00000531480 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 IGHV1-3A0A0C4DH29 117 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms