RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 FAM71F2Q6NXP2 309 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 WWC2-AS2Q96NR7 200 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 PRR25Q96S07 402 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 VCXQ9H320 206 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 CHMP1AQ9HD42 196 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-205ENST00000531042 PIPOXQ9P0Z9 390 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 KIAA1456Q9P272 454 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 A0A0A6YYD4 124 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 RAB29O14966 203 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 BPNT1O95861 308 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 UCHL1P09936 223 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 OR8U8P0C7N1 319 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 NHLRC4P0CG21 123 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-205ENST00000531042 RAB9AP51151 201 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 MED22Q15528 200 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 ZNF260Q3ZCT1 412 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 ASPHD1Q5U4P2 390 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 FAM131AQ6UXB0 335 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 MOB1BQ7L9L4 216 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 MINDY2Q8NBR6 621 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 OR1N2Q8NGR9 330 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 SETD6Q8TBK2 473 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 PLEKHJ1Q9NW61 149 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 SLC23A1Q9UHI7 598 aa12.27□□□□□ -0.45
CPSF1-205ENST00000531042 TRBV6-6A0A0A6YYG2 114 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 CT45A6P0DMU7 189 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 CT45A5P0DMU8 189 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 CT45A7P0DMV0 189 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 GNB1P62873 340 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 ZNF616Q08AN1 781 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 IRF3Q14653 427 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 RPL39P5Q59GN2 51 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 OR6M1Q8NGM8 313 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 OR5B12Q96R08 314 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 PARP12Q9H0J9 701 aaKnown RBP12.26□□□□□ -0.45
CPSF1-205ENST00000531042 LPAR5Q9H1C0 372 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 RIMS4Q9H426 269 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-205ENST00000531042 SCN3BQ9NY72 215 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 FBXO7Q9Y3I1 522 aa12.26□□□□□ -0.45
CPSF1-205ENST00000531042 ITGB1BP1O14713 200 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 RRHO14718 337 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 SOCS1O15524 211 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 INSL3P51460 131 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 CRIP2P52943 208 aaPredicted RBP12.25□□□□□ -0.45
CPSF1-205ENST00000531042 NDPQ00604 133 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 C19orf54Q5BKX5 351 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 LIPKQ5VXJ0 399 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 ZNF660Q6AZW8 331 aaPredicted RBP12.25□□□□□ -0.45
CPSF1-205ENST00000531042 GLDNQ6ZMI3 551 aaPredicted RBP12.25□□□□□ -0.45
CPSF1-205ENST00000531042 FAM89BQ8N5H3 189 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 TMEM203Q969S6 136 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 ABHD14BQ96IU4 210 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 GFI1Q99684 422 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 AGMATQ9BSE5 352 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 GHITMQ9H3K2 345 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 FBXL15Q9H469 300 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 AK3Q9UIJ7 227 aa12.25□□□□□ -0.45
CPSF1-205ENST00000531042 ZNF256Q9Y2P7 627 aaPredicted RBP12.25□□□□□ -0.45
CPSF1-205ENST00000531042 OR5H14A6NHG9 310 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 H0YJW9 148 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 SOX15O60248 233 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 ARSBP15848 533 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 MC5RP33032 325 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 CX3CL1P78423 397 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 P2RY14Q15391 338 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 ECSCRQ19T08 205 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 TMEM91Q6ZNR0 172 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 UFD1Q92890 307 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 HDHD3Q9BSH5 251 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-205ENST00000531042 URM1Q9BTM9 101 aaKnown RBP12.24□□□□□ -0.45
CPSF1-205ENST00000531042 OR1A1Q9P1Q5 309 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 HSF4Q9ULV5 492 aa12.24□□□□□ -0.45
CPSF1-205ENST00000531042 A0A1W2PN81 502 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-205ENST00000531042 FCN1O00602 326 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 SLC17A2O00624 439 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 RBBP9O75884 186 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 GSTP1P09211 210 aaKnown RBP12.23□□□□□ -0.45
CPSF1-205ENST00000531042 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-205ENST00000531042 ZBTB25P24278 435 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 CHRNA7P36544 502 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 CEACAM6P40199 344 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 TMEM50BP56557 158 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 HLA-DRB3P79483 266 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 TPBGQ13641 420 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 OR5AN1Q8NGI8 311 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 EDARADDQ8WWZ3 215 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 DCUN1D4Q92564 292 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 RNF5Q99942 180 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 C11orf54Q9H0W9 315 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-205ENST00000531042 PLGRKTQ9HBL7 147 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 NKX1-2Q9UD57 310 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-205ENST00000531042 MGAT4AQ9UM21 535 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 FOXA2Q9Y261 457 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-205ENST00000531042 WASHC3Q9Y3C0 194 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 AK6Q9Y3D8 172 aaKnown RBP12.23□□□□□ -0.45
CPSF1-205ENST00000531042 NUBP2Q9Y5Y2 271 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 U3KQK5 164 aa12.23□□□□□ -0.45
CPSF1-205ENST00000531042 RYR3Q15413 4870 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms