RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 WFDC11Q8NEX6 87 aa11.87□□□□□ -0.51
TTC39A-216ENST00000530004 GLYATL2Q8WU03 294 aa11.87□□□□□ -0.51
TTC39A-216ENST00000530004 H1FXQ92522 213 aaKnown RBP11.87□□□□□ -0.51
TTC39A-216ENST00000530004 AKR1E2Q96JD6 320 aa11.87□□□□□ -0.51
TTC39A-216ENST00000530004 METTL8Q9H825 291 aaKnown RBP11.87□□□□□ -0.51
TTC39A-216ENST00000530004 C19orf12Q9NSK7 152 aa11.87□□□□□ -0.51
TTC39A-216ENST00000530004 ITGB1BP2Q9UKP3 347 aa11.87□□□□□ -0.51
TTC39A-216ENST00000530004 RNF150Q9ULK6 438 aa11.87□□□□□ -0.51
TTC39A-216ENST00000530004 LINC00312Q9Y6C7 94 aa11.87□□□□□ -0.51
TTC39A-216ENST00000530004 IGHV4-61A0A0C4DH41 118 aa11.86□□□□□ -0.51
TTC39A-216ENST00000530004 ZNF729A6NN14 1252 aaPredicted RBP11.86□□□□□ -0.51
TTC39A-216ENST00000530004 LOXL3P58215 753 aa11.86□□□□□ -0.51
TTC39A-216ENST00000530004 RPL31P62899 125 aaKnown RBP11.86□□□□□ -0.51
TTC39A-216ENST00000530004 MEF2CQ06413 473 aaPredicted RBP11.86□□□□□ -0.51
TTC39A-216ENST00000530004 SRSF4Q08170 494 aaKnown RBP11.86□□□□□ -0.51
TTC39A-216ENST00000530004 DRAM1Q8N682 238 aa11.86□□□□□ -0.51
TTC39A-216ENST00000530004 ZNF645Q8N7E2 425 aa11.86□□□□□ -0.51
TTC39A-216ENST00000530004 CLDND2Q8NHS1 167 aa11.86□□□□□ -0.51
TTC39A-216ENST00000530004 MSI2Q96DH6 328 aaKnown RBP11.86□□□□□ -0.51
TTC39A-216ENST00000530004 OR2D2Q9H210 308 aa11.86□□□□□ -0.51
TTC39A-216ENST00000530004 PATZ1Q9HBE1 687 aaKnown RBP11.86□□□□□ -0.51
TTC39A-216ENST00000530004 UBE2J1Q9Y385 318 aaPredicted RBP11.86□□□□□ -0.51
TTC39A-216ENST00000530004 PRRC2AP48634 2157 aaKnown RBP11.85□□□□□ -0.51
TTC39A-216ENST00000530004 CCDC168Q8NDH2 2452 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 A0A096LNT2 108 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 MPTX1A8MV57 137 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 YPEL1O60688 119 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 RGS11O94810 467 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 ZNF273Q14593 569 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 MORN2Q502X0 79 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 LGI3Q8N145 548 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 GRPEL2Q8TAA5 225 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 EDARADDQ8WWZ3 215 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 YPEL2Q96QA6 119 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 MIOXQ9UGB7 285 aa11.85□□□□□ -0.51
TTC39A-216ENST00000530004 ST8SIA5O15466 376 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 WNT2P09544 360 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 USF1P22415 310 aaPredicted RBP11.84□□□□□ -0.51
TTC39A-216ENST00000530004 F2RP25116 425 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 TMEM200BQ69YZ2 307 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 LRTM2Q8N967 370 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 OR51H1Q8NH63 302 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 LHFPL5Q8TAF8 219 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 TMEM222Q9H0R3 208 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 LINC00574Q9H8X3 128 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 TAS2R3Q9NYW6 316 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 IDI2-AS1Q9NZ38 188 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 LPAR3Q9UBY5 353 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 PSG11Q9UQ72 335 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 F5H0A9 414 aaPredicted RBP11.84□□□□□ -0.51
TTC39A-216ENST00000530004 H0Y980 276 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 IGHV3-7P01780 117 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 IGHV2-5P01817 119 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 LMO4P61968 165 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 SRPXP78539 464 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
TTC39A-216ENST00000530004 ABHD14BQ96IU4 210 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 C18orf12Q96KH6 178 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 OR10C1Q96KK4 312 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 REG4Q9BYZ8 158 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 GAL3ST2Q9H3Q3 398 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 GFOD1Q9NXC2 390 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
TTC39A-216ENST00000530004 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 IFNA21P01568 189 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 CCL3L1P16619 93 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 NFYBP25208 207 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 UCP1P25874 307 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 LRRC37A5PQ49AS3 106 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 PRAMEF5Q5TYX0 476 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 TMEM268Q5VZI3 342 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 GGNBP1Q5YKI7 109 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF841Q6ZN19 808 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 LYZL2Q7Z4W2 148 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 ZBTB34Q8NCN2 500 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 OR8B3Q8NGG8 313 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 PPP1R1CQ8WVI7 109 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 LEAP2Q969E1 77 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 C5orf30Q96GV9 206 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF714Q96N38 554 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 OR8B2Q96RD0 313 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 NMES1Q9C002 83 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 PLSCR3Q9NRY6 295 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 COMMD9Q9P000 198 aa11.83□□□□□ -0.52
TTC39A-216ENST00000530004 TRAV14DV4A0A0A6YYC5 116 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 MMP23AO75900 390 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 LOXL1Q08397 574 aaPredicted RBP11.82□□□□□ -0.52
TTC39A-216ENST00000530004 FGL1Q08830 312 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 MSMO1Q15800 293 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 TMEM30BQ3MIR4 351 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 UTF1Q5T230 341 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 LAMTOR1Q6IAA8 161 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 ZNF695Q8IW36 515 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 C9orf62Q8N4C0 152 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 SLC35G3Q8N808 338 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 FAM216AQ8WUB2 273 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 RAB39BQ96DA2 213 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 C2orf50Q96LR7 162 aa11.82□□□□□ -0.52
TTC39A-216ENST00000530004 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms