RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 LSM10Q969L4 123 aaKnown RBP9.87□□□□□ -0.83
USF1-208ENST00000528768 NARS2Q96I59 477 aaKnown RBP9.87□□□□□ -0.83
USF1-208ENST00000528768 LINC00052Q96N35 136 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 BARX1Q9HBU1 254 aaPredicted RBP9.87□□□□□ -0.83
USF1-208ENST00000528768 Q9UFV3 132 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 KCNS2Q9ULS6 477 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 STRAPQ9Y3F4 350 aaKnown RBP9.87□□□□□ -0.83
USF1-208ENST00000528768 IGKV1D-13A0A0B4J2D9 117 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 A0A1B0GWJ7 208 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 MLNRO43193 412 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 ADAM20O43506 726 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 MED6O75586 246 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 IGKV1-13P0DP09 117 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 CEACAM8P31997 349 aaPredicted RBP9.86□□□□□ -0.83
USF1-208ENST00000528768 CEACAM6P40199 344 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 ASCL1P50553 236 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 ZNF83P51522 516 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 KLF3P57682 345 aaPredicted RBP9.86□□□□□ -0.83
USF1-208ENST00000528768 RPL23AP62750 156 aaKnown RBP9.86□□□□□ -0.83
USF1-208ENST00000528768 BAXQ07812 192 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 PJVKQ0ZLH3 352 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 CATR1Q13166 79 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 C20orf204Q6ZNR8 217 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 SEM1Q6ZVN7 128 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 SPAG16Q8N0X2 631 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 TCTEX1D1Q8N7M0 179 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 OR52M1Q8NGK5 317 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 OR1S2Q8NGQ3 325 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 LHFPL5Q8TAF8 219 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 RNASE6Q93091 150 aaKnown RBP9.86□□□□□ -0.83
USF1-208ENST00000528768 SMIM8Q96KF7 97 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 NARFLQ9H6Q4 476 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 PARP11Q9NR21 331 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 ELOVL5Q9NYP7 299 aa9.86□□□□□ -0.83
USF1-208ENST00000528768 ZANQ9Y493 2812 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 ZSCAN5BA6NJL1 495 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 VSTM5A8MXK1 200 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 INAFM1C9JVW0 142 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 LGALS8O00214 317 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 SPINT2O43291 252 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 CRLF1O75462 422 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 IGHV3-13P01766 116 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 FAM157CP0CG43 387 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 TNFSF4P23510 183 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 CFHR2P36980 270 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 CAV2P51636 162 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 F2RL1P55085 397 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 NMSQ5H8A3 153 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 Q5PR19 223 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 WDR82Q6UXN9 313 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 PRR18Q8N4B5 295 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 OR2Z1Q8NG97 314 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 LRRC29Q8WV35 223 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 TMEM158Q8WZ71 300 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 S100PBPQ96BU1 408 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 RAB40CQ96S21 281 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 GINS3Q9BRX5 216 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 SMIM3Q9BZL3 60 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 ARV1Q9H2C2 271 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 DUSP13Q9UII6 198 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 FAM215AQ9Y5M1 114 aa9.85□□□□□ -0.83
USF1-208ENST00000528768 PITX3O75364 302 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 DFFBO76075 338 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 APOC3P02656 99 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 GZMHP20718 246 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 GABRA2P47869 451 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 EWSR1Q01844 656 aaKnown RBP eCLIP9.84□□□□□ -0.83
USF1-208ENST00000528768 ID3Q02535 119 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 PAX5Q02548 391 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 KRBOX4Q5JUW0 171 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 PRAMEF6Q5VXH4 476 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 ZNF474Q6S9Z5 364 aaPredicted RBP9.84□□□□□ -0.83
USF1-208ENST00000528768 STX12Q86Y82 276 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 FAM219AQ8IW50 185 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 C11orf53Q8IXP5 236 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 ZNF645Q8N7E2 425 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 BPIFCQ8NFQ6 507 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 DMBX1Q8NFW5 382 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 OR51H1Q8NH63 302 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 C17orf50Q8WW18 174 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 TOLLIPQ9H0E2 274 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 TREM1Q9NP99 234 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 LYRM2Q9NU23 88 aaPredicted RBP9.84□□□□□ -0.83
USF1-208ENST00000528768 UFSP2Q9NUQ7 469 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 OR1A1Q9P1Q5 309 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 LAMP3Q9UQV4 416 aa9.84□□□□□ -0.83
USF1-208ENST00000528768 TRIM77I1YAP6 450 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 TNFSF12O43508 249 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 SSSCA1O60232 199 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 FBXO24O75426 580 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 PTBP3O95758 552 aaKnown RBP9.83□□□□□ -0.84
USF1-208ENST00000528768 ADH4P08319 380 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 OR8U9P0C7N5 309 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 PRDX2P32119 198 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 OR3A1P47881 315 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 AKR1C2P52895 323 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 DEFA5Q01523 94 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 COL10A1Q03692 680 aa9.83□□□□□ -0.84
USF1-208ENST00000528768 PXDC1Q5TGL8 231 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms