RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	ATXN7	O15265	892 aa	Predicted RBP	19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BK	O60814	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	IGHV2-70	P01814	119 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BJ	P06899	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BO	P23527	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BB	P33778	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	FGF8	P55075	233 aa	Predicted RBP	19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BD	P58876	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BC	P62807	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST2H2BE	Q16778	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	C1orf87	Q8N0U7	546 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BH	Q93079	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BN	Q99877	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	HIST1H2BM	Q99879	126 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	GGACT	Q9BVM4	153 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	RBKS	Q9H477	322 aa		19.69	■□□□□ 0.74
GSDMD-208	ENST00000528475	LNP1	A1A4G5	178 aa		19.68	■□□□□ 0.74
GSDMD-208	ENST00000528475	ATP6V1F	Q16864	119 aa		19.68	■□□□□ 0.74
GSDMD-208	ENST00000528475	SLC25A40	Q8TBP6	338 aa		19.68	■□□□□ 0.74
GSDMD-208	ENST00000528475	CTDSP1	Q9GZU7	261 aa		19.68	■□□□□ 0.74
GSDMD-208	ENST00000528475		R4GN57	208 aa		19.68	■□□□□ 0.74
GSDMD-208	ENST00000528475	MED12L	Q86YW9	2145 aa		19.68	■□□□□ 0.74
GSDMD-208	ENST00000528475	NDUFS6	O75380	124 aa	Known RBP	19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	UBE2N	P61088	152 aa	Known RBP	19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	TGFBR3	Q03167	851 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	SLC35E4	Q6ICL7	350 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	GALM	Q96C23	342 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	AGMAT	Q9BSE5	352 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	SEC14L6	B5MCN3	397 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	CD59	P13987	128 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	ERVS71-1	P61550	626 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	ALKBH6	Q3KRA9	238 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	FAM210B	Q96KR6	192 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	ZDHHC11	Q9H8X9	412 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	DNAJC13	O75165	2243 aa		19.67	■□□□□ 0.74
GSDMD-208	ENST00000528475	UBE2L5P	A0A1B0GUS4	154 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	IDH3G	P51553	393 aa	Predicted RBP	19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	PSG7	Q13046	419 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	VASH2	Q86V25	355 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	GAR1	Q9NY12	217 aa	Known RBP	19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	ELOA3C	A0A087WX78	387 aa	Predicted RBP	19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	OOEP	A6NGQ2	149 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	CEBPZOS	A8MTT3	80 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	CLDN1	O95832	211 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	IGHV1-2	P23083	117 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	RNFT1	Q5M7Z0	435 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	WDR25	Q64LD2	544 aa	Predicted RBP	19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	TCTEX1D1	Q8N7M0	179 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	OR1L1	Q8NH94	360 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	LOXL4	Q96JB6	756 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	SLC39A9	Q9NUM3	307 aa		19.66	■□□□□ 0.74
GSDMD-208	ENST00000528475	TRBV24-1	A0A075B6N3	115 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	C12orf77	C9JDV5	145 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	PSPN	O60542	156 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	TRGC2	P03986	189 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	OPN1MW	P04001	364 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	OPN1MW2	P0DN77	364 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	OPN1MW3	P0DN78	364 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	S100A2	P29034	98 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	OR3A1	P47881	315 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	CATR1	Q13166	79 aa		19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	INO80C	Q6PI98	192 aa	Predicted RBP	19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	RPP25L	Q8N5L8	163 aa	Known RBP	19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	MRPL37	Q9BZE1	423 aa	Known RBP	19.65	■□□□□ 0.74
GSDMD-208	ENST00000528475	LRRC30	A6NM36	301 aa		19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	ZNF737	O75373	536 aa		19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	GRP	P07492	148 aa		19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	ELL	P55199	621 aa	Predicted RBP	19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	LHX4	Q969G2	390 aa		19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	C5orf30	Q96GV9	206 aa		19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	TMEM147	Q9BVK8	224 aa		19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	OR2D2	Q9H210	308 aa		19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	19.64	■□□□□ 0.74
GSDMD-208	ENST00000528475	RAMP3	O60896	148 aa		19.64	■□□□□ 0.73
GSDMD-208	ENST00000528475	RPL30	P62888	115 aa	Known RBP	19.64	■□□□□ 0.73
GSDMD-208	ENST00000528475	SPNS3	Q6ZMD2	512 aa		19.64	■□□□□ 0.73
GSDMD-208	ENST00000528475	PRR7	Q8TB68	274 aa		19.64	■□□□□ 0.73
GSDMD-208	ENST00000528475	EDARADD	Q8WWZ3	215 aa		19.64	■□□□□ 0.73
GSDMD-208	ENST00000528475	DMRT1	Q9Y5R6	373 aa		19.64	■□□□□ 0.73
GSDMD-208	ENST00000528475	PMS2P5	A8MQ11	134 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	IGKV1D-33	P01593	117 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	IGKV1-33	P01594	117 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	IL2RG	P31785	369 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	OR8G2P	Q6IF36	304 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	TMEM178A	Q8NBL3	297 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	NAT8	Q9UHE5	227 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	MB	P02144	154 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	CEBPD	P49716	269 aa	Predicted RBP	19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	NKX6-1	P78426	367 aa	Predicted RBP	19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	PYY3	Q5JQD4	70 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	CYP2G1P	Q6ZSU1	146 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	LURAP1L	Q8IV03	231 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	C11orf53	Q8IXP5	236 aa		19.63	■□□□□ 0.73
GSDMD-208	ENST00000528475	MED13	Q9UHV7	2174 aa		19.62	■□□□□ 0.73
GSDMD-208	ENST00000528475	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	19.62	■□□□□ 0.73
GSDMD-208	ENST00000528475	ODAM	A1E959	279 aa		19.62	■□□□□ 0.73
GSDMD-208	ENST00000528475	ZNF891	A8MT65	544 aa	Predicted RBP	19.62	■□□□□ 0.73
GSDMD-208	ENST00000528475	RAB29	O14966	203 aa		19.62	■□□□□ 0.73
GSDMD-208	ENST00000528475	HBZ	P02008	142 aa		19.62	■□□□□ 0.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms