RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 TPRX1Q8N7U7 411 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 FAM122AQ96E09 287 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 AKR1E2Q96JD6 320 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 TMED3Q9Y3Q3 217 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 E7EQL1 145 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 K7N7A8 449 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 TNFSF12O43508 249 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 SFTA3P0C7M3 94 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 TMEM33P57088 247 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 AVPI1Q5T686 147 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 ZNF561Q8N587 486 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 OR5D13Q8NGL4 314 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 TMEM56Q96MV1 263 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 TMEM56-RWDD3S4R434 201 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 MED19A0JLT2 244 aaPredicted RBP13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 SPINT2O43291 252 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 OR8U9P0C7N5 309 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 GZMHP20718 246 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 APOBEC3AP31941 199 aaPredicted RBP13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 P2RY1P47900 373 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 FAM201AQ5SY85 155 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 ZNRF1Q8ND25 227 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 OR13A1Q8NGR1 328 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 OR8U1Q8NH10 309 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 KCNS2Q9ULS6 477 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 STRAPQ9Y3F4 350 aaKnown RBP13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 CHD8Q9HCK8 2581 aa13.53□□□□□ -0.24
SNRNP35-204ENST00000527158 PIGBOS1A0A0B4J2F0 54 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 H0Y980 276 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 FOLR2P14207 255 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 F2RP25116 425 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 GRNP28799 593 aaKnown RBP13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 NPBWR1P48145 328 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 PEA15Q15121 130 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 CBLN2Q8IUK8 224 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 SLC35G3Q8N808 338 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 GPHA2Q96T91 129 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 SAP30LQ9HAJ7 183 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 DYNLRB1Q9NP97 96 aa13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 LSM5Q9Y4Y9 91 aaKnown RBP13.52□□□□□ -0.24
SNRNP35-204ENST00000527158 ODAMA1E959 279 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 CDS2O95674 445 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 IFNA4P05014 189 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 UCP1P25874 307 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 Q6ZRG5 221 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 FOXRED2Q8IWF2 684 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 ZCCHC24Q8N2G6 241 aaKnown RBP13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 C15orf54Q8N8G6 183 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 DEFB108BQ8NET1 73 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 DMBX1Q8NFW5 382 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 OR52L2PQ8NGH6 319 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 MS4A5Q9H3V2 200 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 TMEM231Q9H6L2 316 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 RNF115Q9Y4L5 304 aa13.52□□□□□ -0.25
SNRNP35-204ENST00000527158 SSTR5P35346 364 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 EDDM3BP56851 147 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 STUMQ69YW2 141 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 NEUROG1Q92886 237 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 SDSLQ96GA7 329 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 GINS3Q9BRX5 216 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 ZZEF1O43149 2961 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 DUXBA0A1W2PPF3 345 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 TSPAN15O95858 294 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 SELENOHQ8IZQ5 122 aaKnown RBP13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 C1orf87Q8N0U7 546 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 TOLLIPQ9H0E2 274 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 ZNF665Q9H7R5 613 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 FAM96BQ9Y3D0 163 aa13.51□□□□□ -0.25
SNRNP35-204ENST00000527158 PLCE1Q9P212 2302 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 B9A039 149 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 ST8SIA3O43173 380 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 IGLV2-14P01704 120 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 MBPP02686 304 aaPredicted RBP13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 SERPINE2P07093 398 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 DANCRP0C864 163 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 HTD2P86397 168 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 CDSNQ15517 529 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 EFNB3Q15768 340 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 TEX36Q5VZQ5 186 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 LFNGQ8NES3 379 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 OR51H1Q8NH63 302 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 RFESDQ8TAC1 157 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 IL22RA2Q969J5 263 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 ABHD14BQ96IU4 210 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 PARP12Q9H0J9 701 aaKnown RBP13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 NCOR1P1Q9H4R4 102 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 CISD1Q9NZ45 108 aaKnown RBP13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 OR6C3Q9NZP0 311 aa13.5□□□□□ -0.25
SNRNP35-204ENST00000527158 C15orf65H3BRN8 121 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 WNT2P09544 360 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 CR1LQ2VPA4 569 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 ZBTB34Q8NCN2 500 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 SPIN2AQ99865 258 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 SPIN2BQ9BPZ2 258 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 DCTN5Q9BTE1 182 aa13.49□□□□□ -0.25
SNRNP35-204ENST00000527158 FAM234AQ9H0X4 552 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms