RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 MAS1P04201 325 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
PTPRU-210ENST00000527027 VEGFCP49767 419 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 MED21Q13503 144 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 PYHIN1Q6K0P9 492 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 CD200R1LQ6Q8B3 271 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 LYPD6Q86Y78 171 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 JAGN1Q8N5M9 183 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 GHSRQ92847 366 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 ELOVL1Q9BW60 279 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 FBXL15Q9H469 300 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 RNF150Q9ULK6 438 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 LRRC42Q9Y546 428 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 SAA2-SAA4A0A096LPE2 208 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 FCN1O00602 326 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 RRHO14718 337 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 HSPA12AO43301 675 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 IGLV1-51P01701 117 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 IGHV3-11P01762 117 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 SAA2P0DJI9 122 aaPredicted RBP12.37□□□□□ -0.43
PTPRU-210ENST00000527027 MGMTP16455 207 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 DCKP27707 260 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 Q499Y3 187 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 AKIRIN2Q53H80 203 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 SIGIRRQ6IA17 410 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 SGPP2Q8IWX5 399 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 CDH26Q8IXH8 852 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 OR2AK2Q8NG84 335 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 MRPL30Q8TCC3 161 aaKnown RBP12.37□□□□□ -0.43
PTPRU-210ENST00000527027 APH1BQ8WW43 257 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 GALMQ96C23 342 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 RHOVQ96L33 236 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 STUB1Q9UNE7 303 aa12.37□□□□□ -0.43
PTPRU-210ENST00000527027 CRTAPO75718 401 aaPredicted RBP12.36□□□□□ -0.43
PTPRU-210ENST00000527027 LALBAP00709 142 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 FSTP19883 344 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 CD40LGP29965 261 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 RPS11P62280 158 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTPRU-210ENST00000527027 PLGLAQ15195 96 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
PTPRU-210ENST00000527027 ACTBL2Q562R1 376 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 YIF1BQ5BJH7 314 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 DMKNQ6E0U4 476 aaPredicted RBP12.36□□□□□ -0.43
PTPRU-210ENST00000527027 AWAT2Q6E213 333 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 FAM71F2Q6NXP2 309 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 FAM131AQ6UXB0 335 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 HAPLN4Q86UW8 402 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 PPP1R27Q86WC6 154 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 ANKRD13BQ86YJ7 626 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 ABHD5Q8WTS1 349 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 CYYR1Q96J86 154 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 Q96M66 194 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 MS4A10Q96PG2 267 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 SLA2Q9H6Q3 261 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 SCN3BQ9NY72 215 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 BLOC1S6Q9UL45 172 aa12.36□□□□□ -0.43
PTPRU-210ENST00000527027 TRBV5-7A0A0A0MS05 114 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 A0A1W2PPK0 400 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 PDCD6O75340 191 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 CT45A6P0DMU7 189 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 CT45A5P0DMU8 189 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 CT45A7P0DMV0 189 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 MC5RP33032 325 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 UNQ5815/PRO19632Q6UWF5 114 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 SPATA25Q9BR10 227 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 RSRP1Q9BUV0 290 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 IFI27L2Q9H2X8 130 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 CNOT2Q9NZN8 540 aaKnown RBP12.35□□□□□ -0.43
PTPRU-210ENST00000527027 PIPOXQ9P0Z9 390 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 GAB2Q9UQC2 676 aa12.35□□□□□ -0.43
PTPRU-210ENST00000527027 OR5H14A6NHG9 310 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 RAB29O14966 203 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 WBP4O75554 376 aaKnown RBP12.34□□□□□ -0.43
PTPRU-210ENST00000527027 GSTP1P09211 210 aaKnown RBP12.34□□□□□ -0.43
PTPRU-210ENST00000527027 TPPP2P59282 170 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 C6orf141Q5SZD1 244 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 ZNF562Q6V9R5 426 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 LFNGQ8NES3 379 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 FBLIM1Q8WUP2 373 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 CNBD2Q96M20 576 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 OR14A2Q96R54 314 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 RNF5Q99942 180 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 FAM103A1Q9BTL3 118 aaKnown RBP12.34□□□□□ -0.43
PTPRU-210ENST00000527027 YTHDF1Q9BYJ9 559 aaKnown RBP12.34□□□□□ -0.43
PTPRU-210ENST00000527027 PLCXD1Q9NUJ7 323 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 ABRACLQ9P1F3 81 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 STEAP1Q9UHE8 339 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 TPRKBQ9Y3C4 175 aa12.34□□□□□ -0.43
PTPRU-210ENST00000527027 ST8SIA5O15466 376 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 RBBP9O75884 186 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 TFAP2AP05549 437 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 GNAO1P09471 354 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 ARSBP15848 533 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 MYL12AP19105 171 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 HMGN3Q15651 99 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 HAGHQ16775 308 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 RBM48Q5RL73 367 aaKnown RBP12.33□□□□□ -0.44
PTPRU-210ENST00000527027 PGLYRP3Q96LB9 341 aa12.33□□□□□ -0.44
PTPRU-210ENST00000527027 CLCC1Q96S66 551 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms